Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1512 ATGATTGTGACAGGCAAAAGAGAGAGTGAAAAACAAGCAAATATGGCAAAGGGAAATCTTGTCTCTGAGAAAATAAAGCTTCTTCTTGGATTGATTGCTTTGCAGTTGTGTTATGCAGGATTTCACATTGTGTCAAGAGTTGCTTTAAACATTGGTGTTAGTAAAGTCGTTTATCCGGTGTATCGAAACGCGATAGCCTTAGCTCTGTTGAGTCCTTTTGCTTATTTTCTAGAGAAGAATGAAAGGCCACCTCTTACTTTCTCTTTGCTGTTTCAGTTCTTCCTTCTAGCTTTATTGGGAATTACTGCCAATCAAGGATTCTATCTCTTGGGGCTAAACTATGCATCTCCAACATTTGCTTCTGCAATGCAAAACTCAGTGCCTGCTATTACCTTTGTAATGGCTTGTGTTCTGAGACTTGAGCAAGTCAACTTCAGAAGAAGTGATGGTTTGGCAAAGATTTTGGGAACCATTGGGAGTGTTGGTGGTGCAACTGTGATCACTCTCTATAGAGGCCCTCCACTTCTCCACAACAACTACCTAACTCAAGGAAGTAGCATCTTAGAGATGGATGACCCAACAATTAAAGTGCAAAATTGGAGATGGGGTTGTATTTACCTGCTAGGTCACTGCCTTTCTTGGGCTGGTTGGATGGTTTTTCAGGCTTCTCTATTGAAAAAGTATCCAGCAAAACTAACAATAACTTCATACACATGCTTCTTTGGACTGATCCAATTCCTAGTCATAGCTGGCTTTGTGGAAACAGATTATCAGTACTGGAAAATCCAATCTGCTGAAGAACTCTTCACAATCTTATATGCTGGTGTTGTAGCTTCTGGCATTGTCTTCTCTCTCCAAACATGGTGCATCCACAAGAGTGATCCTGTTTTTGTTGCTGTCTTCCAGCCTCTCCAAACTTTCCTAGTAGCCATCATGGCGTTTCTCATCCTTGGTGATCGGTTATTCTCCGGCGGGGTTATTGGTGCTGTTCTTATAACACTTGGGCTTTACTCAGTTCTGTGGGGAAAAAGTAAAGAAAAGGCATTGGAAGAAGAAGAAGATAAGTGTTTAAAACATCCCCTTTTGGATGCTCAAAAAGGAGACAAAGAAGACAATGTTGTTCCAGACATACCATGA 1137 41.07 MIVTGKRESEKQANMAKGNLVSEKIKLLLGLIALQLCYAGFHIVSRVALNIGVSKVVYPVYRNAIALALLSPFAYFLEKNERPPLTFSLLFQFFLLALLGITANQGFYLLGLNYASPTFASAMQNSVPAITFVMACVLRLEQVNFRRSDGLAKILGTIGSVGGATVITLYRGPPLLHNNYLTQGSSILEMDDPTIKVQNWRWGCIYLLGHCLSWAGWMVFQASLLKKYPAKLTITSYTCFFGLIQFLVIAGFVETDYQYWKIQSAEELFTILYAGVVASGIVFSLQTWCIHKSDPVFVAVFQPLQTFLVAIMAFLILGDRLFSGGVIGAVLITLGLYSVLWGKSKEKALEEEEDKCLKHPLLDAQKGDKEDNVVPDIP 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 26391978 26394282 + CmPI595203_06g015120.1 Cmu06g1512 419172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1512 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 61 156 - -
Cmu06g1512 378 PANTHER WAT1-RELATED PROTEIN 32 352 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cmu06g1512 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 345 - -
Cmu06g1512 378 Pfam EamA-like transporter family 202 340 IPR000620 GO:0016020(InterPro)
Cmu06g1512 378 Pfam EamA-like transporter family 28 147 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1911 Cmu-Chr5:29014223 Cmu06g1512 Cmu-Chr6:26391978 1.70E-105 dispersed
Cmu06g1512 Cmu-Chr6:26391978 Cmu11g1324 Cmu-Chr11:25447424 1.40E-62 dispersed
Cmu06g1512 Cmu-Chr6:26391978 Cmu08g1406 Cmu-Chr8:26226469 6.70E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1512 - - - 0.0