Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g1566 | ATGGAGCCGATGGACATAGTTGGAAAGTCTAAAGAGGACGCCTCGCTTCCAAAGGCGACTATGACCAAAATTATCAAAGAGATGTTACCCCCTGATGTACGGGTTGCAAGAGATGCCCAAGATCTTCTGATTGAGTGTTGTGTAGAGTTTATAAACCTTGTATCATCCGAGTCTAATGAAGTTTGTAGCAAAGAAGAAAAAAGAACAATTGCACCTGAACACGTGCTCAAGGCTCTTGAGGTGCTTGGTTTTAGTGAATACATTGAGGAAGTTTATGCTGCATATGAACAACACAGGCTCGAAACTATGCAGGACTCATTGAAAGGTGGGAAGTGGAGTAATGGAGCTGAGATGACCGAAGAAGAAGCTTTGGCTGAGCAGCAAAGAATGTTTGCTGAGGCACGTGCAAGAATGAATGGCAGTAACACTGCACCGAAGCAACCGGAGCCTGAGCAAAGTTTAGAGAGCTAA | 471 | 44.37 | MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCSKEEKRTIAPEHVLKALEVLGFSEYIEEVYAAYEQHRLETMQDSLKGGKWSNGAEMTEEEALAEQQRMFAEARARMNGSNTAPKQPEPEQSLES | 156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 26886063 | 26889019 | - | CmPI595203_06g015660.1 | Cmu06g1566 | 419226 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g1566 | 156 | PANTHER | PROTEIN DR1 HOMOLOG | 1 | 154 | IPR044255 | - | |
Cmu06g1566 | 156 | SUPERFAMILY | Histone-fold | 12 | 142 | IPR009072 | GO:0046982(InterPro) | |
Cmu06g1566 | 156 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 14 | 79 | IPR003958 | - | |
Cmu06g1566 | 156 | MobiDBLite | consensus disorder prediction | 140 | 156 | - | - | |
Cmu06g1566 | 156 | FunFam | Negative cofactor 2 beta | 6 | 143 | - | - | |
Cmu06g1566 | 156 | Gene3D | Histone, subunit A | 4 | 145 | IPR009072 | GO:0046982(InterPro) | |
Cmu06g1566 | 156 | MobiDBLite | consensus disorder prediction | 134 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g1566 | Cmu-Chr6:26886063 | Cmu09g0586 | Cmu-Chr9:5362615 | 4.50E-12 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6424 | PF00808 | CBFD_NFYB_HMF | 2.70E-22 | CL0012 | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g1566 | K21751 | - | csv:101214627 | 303.138 |