Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1696 ATGGCGCGCAAGAAGAGAAACACTGATCCGCGTGCTAAACAATCTCCGGCGGGTCCAAGTGTGTCGAACGCGGCGGAAAAGAGTTCAGTATCTGACAGGGCAAGTAATCAGAACCAAAGTAGGATTGAGCCAGTGGTTATCGATGAATCCGATGGCTTGTCTTCTTCTACAATTAAACTCGAATGCGAGAAGGCTCTTACTGCAATTCGGCGTGGGAACCACACTAAGGCACTTAGGCTTATGAAGGAGTTGAGTTCGAGAAATGAGAACTCTGTTCACTCTGCATTGATTCATCGGGTTCAGGGTACTATTTTTGTAAAAGTAGCGTCGATTATTGATGACCTGAATACAAAGCAGCGACATTTGAAGAATGCGATTGAGTCTGCTCGCAAAGCAGTCCAGCTCTCACCAAACTCGATTGAATTTTCTCATTTCTATGCAAATTTGCTATACGAGGCTGCAAATGATGCCAAGGAGTACGAGGAGGTGGTGCAAGAATGTGACCGGGCCCTTGGAATTGAAAACCCAATTGATCCCGCTAAAGAAAGCTTGCAAGATGAAAAGAGTCAGAAAATACCTACTGCCGAAGCAAGAATTACACATGTTCAGACTGAATTGAGGCAGTTGATTCAAAAATCAAATATATATTCCCTATCATCTTGGATGAAGAACCTGGGTAACGGGGAGGAGAAGTTTAGGTCAATTACGATTAGAAGAGTTGCAGAGGACCCGATGGAGGTGAGGATGGTTCAAGCTAGAAGGGCAAACGAAATCAAGAAAGCAACCAAAACGCCTGAGGAGCGAAGGAAGGAGATCGAAGTTCGTGTTGCTGCTGCAAGGCTGGTGCAACAAAAGTCTGAGACGCCTCAAATGCAGAATGAAGGAGGTAAAGCTGATCGAACCCCGGAATCATCTTCAGGGCCTAGTACAAGAGTTGGTGAGCGGCGGAAACATGGCAATGTGCGGAAACTTGGCTCTTCAGCTGAGAGAAAGAATTGGGTCTGTTCTTTTTGGAGTTCCATGAGTACAGAATCAAAGAAAGATTTGCTCAAGATCAAAATTAGTGATCTTGAGACTTATTTTAGTTCCTTAAAGGATGCCTCGGCAAATGAAGTTATTTTAGAAGCTTTGTCCTTTTATGACGCCAATAAAACATGGAAATTCTGGGTTTGCTGCAAATGTGATAGGAAATCTGTGGATTCGGAATCCCATATGCACCACGTGGTTCAGGAACACCTGGGAAACCTTTTGCCGAAAATGCAATCTATCTTGCCACATAATGTTGATAATGATTGGAGTGAAATGCTTCTTAATTGCTCTTGGAAACCATTGGATGTTTCAGCTACAGCTAGAATGCTCACAGATCAAACAAAATGCAAAGATTCTGAGTTGGCTGAAGATATCTGCCCACAACATCATTCAGAATGTGATGAGTGTTTCAAAGATGCATGGGATTCTTCTCCAGAGAAGCATGATTATGGGAATAGTTTAAATGAATTCAATCTTTATGAGAAAATTAGCAACAGCGGATTTCCAGTACTTGATAGTTTTCCAGTATCTGACGACTCTGAGCGTACAAAGCTTCTTGAGAAAATTCATGCGGTATTTGAGTTACTTATTAAACATAAATATCTTGCTGCAAGCCATCTAAACAAGGTTATACAGTTTACAATGGATGAGTTACAGGGTCTTGTTTCTAGATCTCATCTTCTAAAGCAGGGTCTGGACCAAACACCACTATGTATTTGCTTTCTAGGCGCTTCTCAGCTTAGGAAAATCCTCAAGTTTTTGCAAGAATTATCTCACTCTTGTGGTGTAGGTAGATATTCTGATAGAAGTACTGATCAAATTGAAGATCCAAAGAGTGACAAACAAGTTGCTGATGTAGAAGAGAAAATTGTTCTCAATGGAGATGGGTCACTTCTCCTTCTCAACGAGTGTTTGCTGTCATCTGATATCCCTCATGCCAGTGGTCAGGTTGCAGCCTCAGATCAGATGCCTTCTGCAATTGGCAAGGATGCTGCAAATGAGGTTCTGTCTGATGGTGATCCTTTCCTGTCCTGGGTATATGCAGGTCCCTCTAGTGGGGAACAATTAGCATCATGGGCACAAAGAAAGGAAGAAAAGACACAACGACGAATGGAAATTTTTCAAACGCTTGAGAAAGAATTTTACACTCTGCAGAACCTTTGTGAGAGAAAATGTGAGCATTTGAACTATGAGGAAGCATTGCAATCGGTGGAGGATCTCTGCCTTGAAGTGGGCAAGAAGAGGGAAGCTATGACTGAATTTATCCCCAAGAGTTATGAGTCAATCCTGCGGAAACGAAGAGAGGAGCTTATTGAGGCTGAAAATGATGCAATGTATATTGGCAGTAGGTTTGAGTTAGATGCTGTTACTAATATTTTGAAAGAAGCCGAAGCACTGAATGTTAATCAACTTAGATTTGAGGAAACTTCTGGCAGTGTGTCCTCTCAGCTATATGATTTGGAATCTGGTGAAGATGAAGATTGGAGGGCTAAGGATTATTTGCATCAAGTTGATACTTGCATAGAAGTTGCAATAAAGAGACAGAAGGAACAGCTATCTATCGAGATTAGCAAAATTGATGCACGCATCATGCGAATTGTTACTGGAATGCAAGAGTTGGAACTTAAGCTCGAGCCTGTTTCGGCACATGATTACCAATCAATATTGTTGCCTCTTGTGAACTCATACTTGAGGGCACATTTAGAAGATTTGGCTGAAAAAGATGTCACAAAGAAGTCTGATGCTGCCAGAGAAGCATTTTTAGCTGAACTGGCACTTGATTCAAAAAAGGGTATCAAAAGTGGAAGTGATAATTCAAAACATGCACATGAAAAGCCGAAGGAAAAGAAAAAAAGCAAGGAGTTTAGGAAAGCCAAGGACTCTAAGGTGGTCAATGCTCCTGAGCAGGATGTGCTTCATGATGAGGCTGTGGATGGAGATCCCTGTCAAATTCCATCTGATGGTGATGCGGCGGAGGTGGACATTCCTGTTATTGAAAACTCTGACGCTTTAAGACTACAGGAGGAAGAGATAAGACGCAAAATTGAGCTGGAAGCAGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAATGAGGCTAAACAAAAGCATCTGGCTGAATTACAAAAGAAATCTGCACAGACAAATCTAGAGGATAAAGCTGCTCTGGCAGTACATGATAATCTCATTGGACCTGCCCCCAGTGTTGAGGGTGTTGGTGAGCATTTTAAGCCCTCTGTGATGGATCAATTGGCAGAAAGTGAATTGGTTCCTGACTTGTCACCACCGAAGGCTTCTTCAGCAGGTGCATCCAATGTAGCAATTCTAGAGACTAGTCTACCGTCTTCTGATAGGAGGAGGGGAAGGAAAGGTAGACGGCACAAGGCTTCAATCAAACAAGTAGATGGAAATCAGCCTTCACAATCTGAGAAGGATAATGTAGCCTTTGACAACCAATTGAATGAGCAAGTTAGACATCATGACAATCTCCTAGTAGATAGTGTTAAACCACTTTCTGAAGATTATAGTACAAAGACTTTGAGACAACAACATGCAGCGGATGATGAGGAAAGATTTCAAGCTGACCTTAAGAAGGCTGTACGGCAGAGCCTTGATGCATTTCAAGAAAAGCAGAAATTGCCCTTGGTTACAAGTTCTAGGACACCGTTGATCAGTCGTGGTGAAGTAGATAGTAATGATCCTCCATCAAATGAACTCAATGTGGACAATATCTGTGGTACAGGACTTAAGAATGAAGTTGGTGAATATAATTGCTTTCTGAATGTGATTATTCAGTCCTTGTGGCATTTAAGACGGTTTCGAGAAGAGTTTCTGAGAAGATCTATGACTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGAAATCTTCACTGCCTTGAGCATGGCTTCTGCAGATGCTAGAAGAGAAGCAGTTGCTCCCACTTCTCTAAGAATAGCTCTGAGCAATCTGTGTCCTGATAGTAATTTTTTCCAAGAGGGCCAGATGAATGACGCCTCTGAAGTGCTGGCTGTCATATTTGATTGCCTACACCAGTCATTGACTCCTAGTTCGAGCATTTCTGATACAGAATCAGTGGAAAGCAATTGTATGGGGTCGTGGGACTGTGCAAGTGACAGTTGTTTGGTACATTCCATCTTTGGCATGGACATTTTTGAACGAATGAATTGCTATAGTTGTGGCCTGGAATCTAGACATCTGAAGTACACTTCCTTCTTTCACAATATAAATGCCAGTGCCCTTCGAACAATGAAGGTTATGTGTACAGAAAGCTCCTTCGATGAACTTCTGAATGTTGTGGAAATGAATCATCAGCTAGCTTGTGATTTGGATGTCGGTGGTTGTGGAAAGCTCAATTACATTCATCACTTTCTCTCTGCACCACCACATGTGTTCACAACAGTCTTGGGCTGGCAGAACACTTGTGAGAATGCTGATGACATATCCGCGACATTAGCTGCTCTGAATACCGAGATAGATATCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAATACACATAATTTGGTATCAGTGGTTTGCTATTATGGTCAGCACTATCATTGTTTTGCTTACAGTCACGACAAGAAATGCTGGATAAAGTATGATGATAGAACTGTTAAGGTAATTGGCGATTGGCCTGATGTTCTTACCATGTGCGAAAAAGGACATTTGCAACCTCAGATTTCAGTGAATCAATATGAATCAGTCTTCAAATTCCCTATGCTGCATTTGGTGCCTATCTGGATTTATTCAAAATCTTATATCTTCTCTGTTTACTGA 4860 41.81 MARKKRNTDPRAKQSPAGPSVSNAAEKSSVSDRASNQNQSRIEPVVIDESDGLSSSTIKLECEKALTAIRRGNHTKALRLMKELSSRNENSVHSALIHRVQGTIFVKVASIIDDLNTKQRHLKNAIESARKAVQLSPNSIEFSHFYANLLYEAANDAKEYEEVVQECDRALGIENPIDPAKESLQDEKSQKIPTAEARITHVQTELRQLIQKSNIYSLSSWMKNLGNGEEKFRSITIRRVAEDPMEVRMVQARRANEIKKATKTPEERRKEIEVRVAAARLVQQKSETPQMQNEGGKADRTPESSSGPSTRVGERRKHGNVRKLGSSAERKNWVCSFWSSMSTESKKDLLKIKISDLETYFSSLKDASANEVILEALSFYDANKTWKFWVCCKCDRKSVDSESHMHHVVQEHLGNLLPKMQSILPHNVDNDWSEMLLNCSWKPLDVSATARMLTDQTKCKDSELAEDICPQHHSECDECFKDAWDSSPEKHDYGNSLNEFNLYEKISNSGFPVLDSFPVSDDSERTKLLEKIHAVFELLIKHKYLAASHLNKVIQFTMDELQGLVSRSHLLKQGLDQTPLCICFLGASQLRKILKFLQELSHSCGVGRYSDRSTDQIEDPKSDKQVADVEEKIVLNGDGSLLLLNECLLSSDIPHASGQVAASDQMPSAIGKDAANEVLSDGDPFLSWVYAGPSSGEQLASWAQRKEEKTQRRMEIFQTLEKEFYTLQNLCERKCEHLNYEEALQSVEDLCLEVGKKREAMTEFIPKSYESILRKRREELIEAENDAMYIGSRFELDAVTNILKEAEALNVNQLRFEETSGSVSSQLYDLESGEDEDWRAKDYLHQVDTCIEVAIKRQKEQLSIEISKIDARIMRIVTGMQELELKLEPVSAHDYQSILLPLVNSYLRAHLEDLAEKDVTKKSDAAREAFLAELALDSKKGIKSGSDNSKHAHEKPKEKKKSKEFRKAKDSKVVNAPEQDVLHDEAVDGDPCQIPSDGDAAEVDIPVIENSDALRLQEEEIRRKIELEADERKLEETLEYQRRIENEAKQKHLAELQKKSAQTNLEDKAALAVHDNLIGPAPSVEGVGEHFKPSVMDQLAESELVPDLSPPKASSAGASNVAILETSLPSSDRRRGRKGRRHKASIKQVDGNQPSQSEKDNVAFDNQLNEQVRHHDNLLVDSVKPLSEDYSTKTLRQQHAADDEERFQADLKKAVRQSLDAFQEKQKLPLVTSSRTPLISRGEVDSNDPPSNELNVDNICGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLRRSMTEHVHVGDPCVVCALYEIFTALSMASADARREAVAPTSLRIALSNLCPDSNFFQEGQMNDASEVLAVIFDCLHQSLTPSSSISDTESVESNCMGSWDCASDSCLVHSIFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCTESSFDELLNVVEMNHQLACDLDVGGCGKLNYIHHFLSAPPHVFTTVLGWQNTCENADDISATLAALNTEIDISVLYRGLDPKNTHNLVSVVCYYGQHYHCFAYSHDKKCWIKYDDRTVKVIGDWPDVLTMCEKGHLQPQISVNQYESVFKFPMLHLVPIWIYSKSYIFSVY 1619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28005103 28013607 + CmPI595203_06g016960.1 Cmu06g1696 419356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 942 974 - -
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 13 48 - -
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 1113 1127 - -
Cmu06g1696 1619 Pfam Ubiquitin carboxyl-terminal hydrolase 1263 1570 IPR001394 GO:0004843(InterPro)|GO:0016579(InterPro)
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 1 48 - -
Cmu06g1696 1619 Coils Coil 1017 1066 - -
Cmu06g1696 1619 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1588 IPR052398 -
Cmu06g1696 1619 CDD Peptidase_C19 1354 1576 - -
Cmu06g1696 1619 Pfam Protein of unknown function (DUF629) 335 853 IPR006865 -
Cmu06g1696 1619 SUPERFAMILY Cysteine proteinases 1262 1577 IPR038765 -
Cmu06g1696 1619 Gene3D Cysteine proteinases 1250 1595 - -
Cmu06g1696 1619 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1262 1596 IPR028889 -
Cmu06g1696 1619 Gene3D Tetratricopeptide repeat domain 53 197 IPR011990 GO:0005515(InterPro)
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 281 324 - -
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 943 974 - -
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 310 324 - -
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 283 309 - -
Cmu06g1696 1619 Pfam Protein of unknown function (DUF627) 65 174 IPR006866 -
Cmu06g1696 1619 MobiDBLite consensus disorder prediction 1106 1159 - -
Cmu06g1696 1619 Coils Coil 112 132 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1696 - - - 0.0