Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1701 ATGGAATTGAAATCGGAGACTTCCAGTTTTAGCAACAAATGGGTATCAACAGTTGCTAGCGTATGGATTCAATGCACTAGCGGATCTCTTTACACTTTCTCCATATACTCCCAAACCCTCAAATCAACTCAGGGATACGATCAATCCACTTTGGATATTGTTTCTGTTTTCAAAGACATCGGTGTCAATTGTGGCGTCCTTGCGGGCTTTCTCTATTACTATGCCACCGCTGATGGTCGTCGTCCTGGGCCGTGGATTGTTCACTTGGCCGGTGCAATTCAGTGCTTCTTGGGGTATTTCTTTATCTGGGCTGCCGTTTCTGGGGTCTTTCCTCGGCCGGCGGTTCCCGTTATGTGCCTTTTCATGTTGGTGGCTGCTCATGCTCAGAGTTTCTTCAACACGGCTAACGTTGTCACTGGCGTTCGGAATTTCCCCAGTTATAGTGGGACGATTGTTGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAGTATACGAGACAATATTTAATGGGCAACCTACTTCGTTTCTTCTGATGTTGGCGCTGCTTCCAGCCCTTAATTCCTTATTGTGTATGTGGTTCGTGAGAATCCACCATGCAGATAATGGGATTGAAAAAGAGCATCTGAATACCCTATCCATAATTACTCTGCTCGTTGCTACTTACCTTATGATCAAGATAGTTCTAGAGCATATTTTCACCTTCCAATTCCCTTTACATGTTGCTACATTTGTTCTACTTTTGATGTTGCTTGCATCTCCTCTATATATTGCAATTAGAGCCCAACAGAGAGAGTCCAGAAGTATTTTGCACCCTTCTTTTACTGAGAGCGACCGGCTGATTGGTCGCTCCAATCAAGAGACTTCGGATTTTGACTATGAACGGAGAAGGGAATCTGAAGAAAGCCTGAACCTCTTTCAAGCTTTGTACACAATAGACTTCTGGATATTGTTTTTTGCGACTGCTTGTGGCATGGGAACAGGGTTAGCTACAGTGAATAATATCAGCCAGATAGGATTATCTCTCGGTTATACAAGCTTGGAGATAAATACTTTGGTTTCGTTGTGGAGTATTTGGAACTTTTTTGGTCGTTTTGGAGCTGGGTATGTGTCAGATTATTTTCTGCATGTCAAAGGATGGGCTAGGCCGTTGTTCATGTTCATCACTCTGACAACCATGGGCATTGGACATGTAGTGATTGCTTCTGGCCTGCCTGGTGCTCTTTTTGCTGGTTCGGTAGTAGTGGGTGTTTGTTATGGGTCTCAGTGGTCACTAATGCCAACAATTGCTTCTGAAATATTTGGTGTTGTACACATGGGTACTATATTCAATGCCGTAACAGTAGCAAGCCCTGTTGGATCTTATTTATTTTCAGTTAGAGTTGTTGGGTATATATATGACAAGGAAGCATCAGAAGGCTGCAACACTCATGAAATGTGGAGGTTTTTCCTGGTTGCTGCTAGTAAGGTAGTTCAATTCTTTTTTTCTTCTTCCTCTTTGCCTGTCCAGCCTACAACATATGCTGTCGTGAAGCAAGAATCAGCCAGAATGGATGACTCTTACATGGCTCTGTGGAGGACATGA 1599 43.34 MELKSETSSFSNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQGYDQSTLDIVSVFKDIGVNCGVLAGFLYYYATADGRRPGPWIVHLAGAIQCFLGYFFIWAAVSGVFPRPAVPVMCLFMLVAAHAQSFFNTANVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYETIFNGQPTSFLLMLALLPALNSLLCMWFVRIHHADNGIEKEHLNTLSIITLLVATYLMIKIVLEHIFTFQFPLHVATFVLLLMLLASPLYIAIRAQQRESRSILHPSFTESDRLIGRSNQETSDFDYERRRESEESLNLFQALYTIDFWILFFATACGMGTGLATVNNISQIGLSLGYTSLEINTLVSLWSIWNFFGRFGAGYVSDYFLHVKGWARPLFMFITLTTMGIGHVVIASGLPGALFAGSVVVGVCYGSQWSLMPTIASEIFGVVHMGTIFNAVTVASPVGSYLFSVRVVGYIYDKEASEGCNTHEMWRFFLVAASKVVQFFFSSSSLPVQPTTYAVVKQESARMDDSYMALWRT 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28047481 28052540 + CmPI595203_06g017010.1 Cmu06g1701 419361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1701 532 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 497 - GO:0016020(PANTHER)
Cmu06g1701 532 Pfam Nodulin-like 13 264 IPR010658 -
Cmu06g1701 532 SUPERFAMILY MFS general substrate transporter 219 474 IPR036259 -
Cmu06g1701 532 Gene3D MFS general substrate transporter like domains 214 501 IPR036259 -
Cmu06g1701 532 CDD MFS_Mch1p_like 13 482 - -
Cmu06g1701 532 SUPERFAMILY MFS general substrate transporter 9 203 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1699 Cmu-Chr6:28036210 Cmu06g1701 Cmu-Chr6:28047481 8.30E-162 dispersed
Cmu06g1701 Cmu-Chr6:28047481 Cmu11g0775 Cmu-Chr11:8257824 4.10E-65 dispersed
Cmu06g1700 Cmu-Chr6:28042522 Cmu06g1701 Cmu-Chr6:28047481 2.20E-139 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1701 - - - 0.0