Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1714 ATGGCGACGGTTCCTGACCGCTTCCGTCGCAACCCCATCGACAGACTTGTTGGGATTTCCGACGATTCGAAACAGAGTTGTAGTTCGACGACCCAGCTTCATGTTCTTGCTGTTGATGATAGCCTCGTCGATCGGAAGGTTATTGAGCGGTTGTTGAAGATCTCGTCGTGTAAAGTTACTGCTGTTGAGAGCGGGAGAAGTGCTCTTCAGTATCTGGGTTTGGATGGGGAAAACAATTCTGTTCAGTTTAGTAGTGGTTTGAAGGTGAATCTCATCATTACAGATTACTCCATGCCTGAAATGACTGGATATGAATTGCTCAAGAAGATCAAGGAATCATCAGCTTTCAGGGAGATTCCTGTTGTGATAATGTCATCAGAGAATATTTTGGCTCGAATAGACAGTTGCTTGAAGGAAGGGGCTGAAGAATTCATAGTGAAGCCTGTGAAATTGTCTGATGTGAAACGATTGAAAGATTTCATTATGGAAGGAGAAAATGAAGGAAAGAAAATTGGGTCAAAGAGGAAGCTACATTTTGATCATGATCACGATCACCACCCGTCGTCTCCAGTTTCTCCGGCGTCATCCGCGGCAGTGTTCGACCCTTGCCATGGATTTCTGCAACGATCAGCACCGTCATTTCGACACGAAGACGAAGACAAAGGCGAAGACGAAGAGCCAAAGCAGAGAGCTTCATCGGAGCTAAGGAAAATGACTCACTCGAAGCTTGAAGACGCCACTGGTTTGAAGGAAGACCTCATCGCAGACGCCTGGGCCGCCGCCATTAAAGCTCACAAACATTCGAAGCCATTTCTCGTTGATAAAACCCGAGATTTCTCCATCATCAGCTTCGCCGGATCTTGGTCGTCCGAAGCCTGGTTCTCTGCTTCTGATTCATCTTTCGGAGAAACAAAGATCGACACTCGGCTGTTTCCATCCGTCAGGAGCATCGGCGTCGACGATTATGCAGTCGTCAACTCTGCATTTTTCCAGAAATTTGAGGGAATTTTGGGGAAGCTTAAGGAGGTTCTGAGAGTGAATAAGCCTGTGGTGTTTACTGGCCACTCAGCCGGAGGTCCGATAGCCATTCTCGCAACCATCTGGCTGTTGGAACAGCAAAGAAACTCAGACTCAAACACCAACTCCACTCCTCCAAGATGCATCACATTTGGATCTCCCCTTGTTGGCAACTTCATTTTCTCCCATGCCCTCAAAAGGGAGAAATGGTCCACCCATTTCGTGCACTTCGTCATGAGATACGACATTGTTCCACGAATCCATGTTGCTCCTCTACCTTCTTTGCAACCACAATTGCAAACCATCCTCAACTCCCTGAACTCGAGATCACCAGGGTCATCATCAAATGGAAATATAGCTACTGAATTCTTCATGACGGTGATGAGGAATGCATCGGCTGTGGTAAGCAACGCCGCCTGCCATCTTATGGGAAATACTAACCTTTTGCTAGACACTTTGAAAAGCTTTGTGAAATTGAGTCCTTACAGCCCTTTTGGCACTTACATTTTCTTTACTGAGAGCGAGAAAGTGGTGGTGGTGAGCAACCCGGATGCTATTTTACAAATACTATTCTACGCTTGTCAGTTGAGCTCTGAGAGCGAATCTGATCACATTGCTCAACAGAGTTTAAATGCCCATTGGGGTTATGAATCTAAAATGCAGAAATTGGAGCTCCTACATGCCATTCGTCTGGATGAATTGGATAAGCTTCCATTGTCCTTAACGAGCAGGAATACACCATTAACTGAAGCGTTGAATGAACTTGGCCTAAGTTCGAGAGCTTTATTGAATCTTCGGGCAGCGGGCACATTTGAAGAGCAGAAAATGAAAAATCAACAAAGGATGGAAGCAAAGAAACAATATATCAAGGAACGATTGGATTGGCTAGAAGAAAATTATAGAGCTGTATGTAAGGTTGATGGTTTGGGATACTATGATGCATTTAAACTCCAGAAGGATCCGAAAGACTTCCAAGCTAATATCAAGAGGCTTGAGCAAGCAGGCATATGGGATGAGATCGTAGAGATGCTCAAAAGATACGAGCTCCCAGAGGAATTCGAGGGCGATGACGAATGGATAAAACTTGGAACCAGGTTTCGCCGTCTCATTGAGCCTCTAGATATTGCTAACTACTATAGACACTCGAAGAATGATGATACTGGTCCTTATCTTGTAAAAGGAAGGCCAAAACGTTACAGATTTACACAAAGATGGCTCGAACATAATCAAAAGATGACAGAACCCAGTGAAGAATCAACTCTTTGGGCAAGGGTTGAGGAGCTTCGTATCCAAACCAAAACCAAAATGTACGCTGAATATTCAAGAGAAATTATAGAGCTGGAGAAGAAGATGAAGCGATGGGTCACTGAGATTGAAGATGACATGTTGTTAAAGAAATCTACCTTCATGGAGTGGTGGAAGACACTACCGGAACATCATAGATCACAGTCTTGTATTAGGGATGATATCGAGAGGATGGCAACTGACGACGATGCTATTAACACGATGTAG 2529 44.6 MATVPDRFRRNPIDRLVGISDDSKQSCSSTTQLHVLAVDDSLVDRKVIERLLKISSCKVTAVESGRSALQYLGLDGENNSVQFSSGLKVNLIITDYSMPEMTGYELLKKIKESSAFREIPVVIMSSENILARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGENEGKKIGSKRKLHFDHDHDHHPSSPVSPASSAAVFDPCHGFLQRSAPSFRHEDEDKGEDEEPKQRASSELRKMTHSKLEDATGLKEDLIADAWAAAIKAHKHSKPFLVDKTRDFSIISFAGSWSSEAWFSASDSSFGETKIDTRLFPSVRSIGVDDYAVVNSAFFQKFEGILGKLKEVLRVNKPVVFTGHSAGGPIAILATIWLLEQQRNSDSNTNSTPPRCITFGSPLVGNFIFSHALKREKWSTHFVHFVMRYDIVPRIHVAPLPSLQPQLQTILNSLNSRSPGSSSNGNIATEFFMTVMRNASAVVSNAACHLMGNTNLLLDTLKSFVKLSPYSPFGTYIFFTESEKVVVVSNPDAILQILFYACQLSSESESDHIAQQSLNAHWGYESKMQKLELLHAIRLDELDKLPLSLTSRNTPLTEALNELGLSSRALLNLRAAGTFEEQKMKNQQRMEAKKQYIKERLDWLEENYRAVCKVDGLGYYDAFKLQKDPKDFQANIKRLEQAGIWDEIVEMLKRYELPEEFEGDDEWIKLGTRFRRLIEPLDIANYYRHSKNDDTGPYLVKGRPKRYRFTQRWLEHNQKMTEPSEESTLWARVEELRIQTKTKMYAEYSREIIELEKKMKRWVTEIEDDMLLKKSTFMEWWKTLPEHHRSQSCIRDDIERMATDDDAINTM 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28166954 28174336 - CmPI595203_06g017140.1 Cmu06g1714 419374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1714 842 MobiDBLite consensus disorder prediction 213 242 - -
Cmu06g1714 842 Pfam Response regulator receiver domain 35 154 IPR001789 GO:0000160(InterPro)
Cmu06g1714 842 Coils Coil 769 796 - -
Cmu06g1714 842 SUPERFAMILY alpha/beta-Hydrolases 272 434 IPR029058 -
Cmu06g1714 842 PANTHER PROTEIN EDS1-RELATED 242 827 IPR044214 GO:0006952(InterPro)
Cmu06g1714 842 CDD REC_typeA_ARR 35 157 - -
Cmu06g1714 842 Pfam Lipase (class 3) 282 427 IPR002921 GO:0006629(InterPro)
Cmu06g1714 842 SUPERFAMILY CheY-like 32 157 IPR011006 -
Cmu06g1714 842 CDD Lipase_3 272 437 - -
Cmu06g1714 842 Pfam Enhanced disease susceptibility 1 protein EP domain 637 824 IPR041266 -
Cmu06g1714 842 Gene3D alpha/beta hydrolase 239 560 IPR029058 -
Cmu06g1714 842 ProSiteProfiles Response regulatory domain profile. 34 162 IPR001789 GO:0000160(InterPro)
Cmu06g1714 842 Gene3D - 32 191 - -
Cmu06g1714 842 SMART REC_2 33 158 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1714 Cmu-Chr6:28166954 Cmu10g2355 Cmu-Chr10:29898023 1.10E-38 dispersed
Cmu04g0274 Cmu-Chr4:7295884 Cmu06g1714 Cmu-Chr6:28166954 3.20E-45 transposed
Cmu04g0488 Cmu-Chr4:16934590 Cmu06g1714 Cmu-Chr6:28166954 1.20E-41 transposed
Cmu05g2725 Cmu-Chr5:35717799 Cmu06g1714 Cmu-Chr6:28166954 6.60E-42 transposed
Cmu07g0570 Cmu-Chr7:7031110 Cmu06g1714 Cmu-Chr6:28166954 1.90E-39 transposed
Cmu08g0531 Cmu-Chr8:17251012 Cmu06g1714 Cmu-Chr6:28166954 4.20E-35 transposed
Cmu05g2549 Cmu-Chr5:34264382 Cmu06g1714 Cmu-Chr6:28166954 2.60E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6446 PF18117 EDS1_EP 2.50E-52 No_clan Cmu TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1714 K18875 - csv:101214385 1006.51