Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1723 ATGTTGGTCTTTTTAGTTCATTGCAATCTTCGCCAATACCATCGCATCGTCTTGTATCTGTATGTCTTCTGGCCTCCTATGTTGTCGCAGAAAAGAAACCCAGATGATGGAGATGGTCCGGCGGATGGTGATAATCCCGATGATAAGCGTAGAAAGTTTTGTTTATGGAGCGTGGTTCGTGATGCCACATCATTGCAATCAATGCAACAACTATTGGAGCCAGTCATTCGTAAAGTGGTAAGGGAGGAGATTGAATCTGCACTAAGAAAGTACATTACCAATGTGCAAAGGAATGACGAGAATGATGGGAAAGAAATCTATTCTTCCGGGCCGAGATGCTTTCAATTGAAGTTTATAACTGATATTTCTCTCCCGGTATTTACTGGAGCTCGCATTGAAGGAAGAGATGGTTCCAGCTTGATGGTGGCTTTGGTTGACACCTTAACTGGGGAAGTTGTTGGCACTGGGTCTCAATCCTCAGCCAAAGTGGAAATTGTAGTGCTCGAGGGTGATTTTGAGGGTGGAAGTGATAGTTACACTGCAGAGGAGTTCAAGAATAACATTGTAAGAGAGAGGGAAGGGAAGAAACCACTTCTTACAGGAGATACATGTGTGAGTCTCAAAGATGGCATTGGTTTGGTAGGTGAGATTTCTTTCACTGACAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTCGGTGCAAGAATTATAGACGACAATGATGGAACGAGAATACTGGAAGCAAAGACTGCGTCATTTGTGGTCAGAGATCACCGTGGAGAATTGTACAAAAAGCACCACCCTCCATTTCTGCAGGATGAAGTATGGAGATTGCAGAAAATTAGCAAGGATGGAGCCTATCATAAGCGCCTGAGCCAAGAAAAAATTGAGACAGTGAAAGATTTCCTTACTCTGCTTTATATACAACCTTCAAGGCTTCGTAATATTCTTGGCCCTGGCATGTCTACGAAAATGTGGGAAACTACAATTGAGCATGCACAGACATGTGTGCTCGATCGGAAGATTTACGTCTACAATCCCCATGATTTGGAACAGAAAAGTGGAGTGGTCTTTAATGTTGTAGGACAAGTGATGGGGCTACTTTCAGATCACCAGTACGTTCCCATAGATAAGCTATCTGAAAGTGAAAAGGCTGATGCTCATAACTTGGTTATCTCTGCGTACAAACATTGGGAAGAAGTCAACTCCATTGATGATGAAACTTCTCTTGTGGGTGGCTCTTCTCACCCACTCAGTTTCCTTTACACCCCCAGCTCACCCATGGAGGACCATTATGGTAGCAAGTACTTGGCTTCTCCAAAATTTAGTGGCTTTGATTTCACACCATCAAATGTCTATTCGTCTGACATAATTTCATCGATGGGTTCTATTGGGAATCCTAGCAGCTTGGACGATCATGCTTTGCAGGGTTTTGATTCTATGGTTGTAAGATATGATCAGATACCAAGTTCCCCAAACTTTGCCAACTCTTCTCTGATCTGCGATTCCGAGCCACTAAACTCATCTTTCTTTGATGTGGATCATACGCAAGTCTTAGAGTCTGATTTGCAATGCAGCTCGATTTTAGAATCACGAGCAATTACAACAACTCTTCAAGGTGGCTCCTCATCATGTGGTGCTCAAATGAGATGGGCTAAATTATATGGTGTGCTAAAATGGTACATTTTGTTGAGGTTGGTAATTAGGAGAAACAAACGCGGGTTCGAGATATACAAAGTTTTGTTCTTCCAAGTGTTTTGGTTATGCTATGTCTCTGAGCCAGAAGATTTTTTTCTCTCTGATTCAAGTGTTTGTACATTGGTGTAG 1830 42.62 MLVFLVHCNLRQYHRIVLYLYVFWPPMLSQKRNPDDGDGPADGDNPDDKRRKFCLWSVVRDATSLQSMQQLLEPVIRKVVREEIESALRKYITNVQRNDENDGKEIYSSGPRCFQLKFITDISLPVFTGARIEGRDGSSLMVALVDTLTGEVVGTGSQSSAKVEIVVLEGDFEGGSDSYTAEEFKNNIVREREGKKPLLTGDTCVSLKDGIGLVGEISFTDNSSWTRSRRFRLGARIIDDNDGTRILEAKTASFVVRDHRGELYKKHHPPFLQDEVWRLQKISKDGAYHKRLSQEKIETVKDFLTLLYIQPSRLRNILGPGMSTKMWETTIEHAQTCVLDRKIYVYNPHDLEQKSGVVFNVVGQVMGLLSDHQYVPIDKLSESEKADAHNLVISAYKHWEEVNSIDDETSLVGGSSHPLSFLYTPSSPMEDHYGSKYLASPKFSGFDFTPSNVYSSDIISSMGSIGNPSSLDDHALQGFDSMVVRYDQIPSSPNFANSSLICDSEPLNSSFFDVDHTQVLESDLQCSSILESRAITTTLQGGSSSCGAQMRWAKLYGVLKWYILLRLVIRRNKRGFEIYKVLFFQVFWLCYVSEPEDFFLSDSSVCTLV 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28236858 28242238 + CmPI595203_06g017230.1 Cmu06g1723 419383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1723 609 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
Cmu06g1723 609 PANTHER OS02G0177800 PROTEIN 51 566 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cmu06g1723 609 Pfam Calmodulin binding protein C-terminal domain 342 404 IPR046829 -
Cmu06g1723 609 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2345 Cmu-Chr3:32095133 Cmu06g1723 Cmu-Chr6:28236858 3.10E-54 dispersed
Cmu06g1382 Cmu-Chr6:24992872 Cmu06g1723 Cmu-Chr6:28236858 1.90E-93 dispersed
Cmu06g1723 Cmu-Chr6:28236858 Cmu02g1510 Cmu-Chr2:28801728 2.80E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1723 - - - 0.0