Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1758 ATGACATCAAGTATGTTGAGTGGAGAAAGAAGGTGGACATCAGCCAGACGAGGTGGGATGACAGTTTTAGGAAAGGTTGCTGTTCCAAAACCTATAAACTTACCCAGTCAAAGGTTAGAAAACCATGGTTTGGACCCTAATGTGGAAATTGTACCCAAGGGTACCCTCAGTTGGGGCAATAAATCAACTTCATCTGCAACAAATGCATGGGGTTCCGCATCTGTTTCTCCAAATACAGATAGTGCTTCTGGTTCACCAAGCCATTTCTGTGGTCGCCCTTCATCTGCTGGAGGTGGCACTCGTCCGTCAACAGCTGGCAGTGACAGGTCCCACGAACCTCATGCTAATGCATGGGGACCAAGTTCTAGACCATCATCTGCATCTGGACCTGTGACATTAAGCCATGCATCACTCACATCCTTGCGTCCTCACAGTGCCGAAACTAAATCTAGTAGCTCACAATTGTCACGATTTGCAGAGACTTCTGAAAATCCAGTGGCTTGGAATTCTGCTGTGACTACAGAGAAAGTGGGAACGTTGCCATGCAAGAGTGATGGGTTTTCTTTGACGTCTGGAGATTTTCCTACACTGGGTTCAGAGAAAGAAAGTGTAGGAAAGGATGCTGAGTCACAAGATAATAGGTCTAATGGAGGAGCTACGATGAAAGAGAGGACTGAAACTTCGGCAATTGATGATCCTAAAAATGTGACCACAAGTGTTGCAAGTGCTAATTCCTGGAGAAGTGATAATCTTCCACACAACGATGATGGATCTAGGCCAAATGTAGAGAAATGGCTGGGGCATCCCCAACCTTACCCTGGTGCAAATATTCCTCCCCCACATTATGACGCCTGGCATGGTTCTCCAGTAAACAATCCTCAAGGTGGTGTATGGTATAGAGGTCCTCCACAAGGAGGTCCTCCATATCGAACTCCAGTTGCTCCTGGTAATTTCCCGCTGGATCCATTTATGTATTATCCTCCACAGATTCCCCCTGGTGGCCTTCCCAATCCCCAGCCTCCTCATGGAACTGGACCCAGGGGACACCATCCTAAAACTGGAGATATATACAGACCACCTATGCATGATGGTTTTATTCACCCAGGCATGTCAATTAGACCTGGATTTTACCCAGGTCCAGTTACCTATGATGGATATTTTCGACCTCCCATGGGCTACTGCAATTCAAATGATAGAGATGCTCCATTTATGGGACTGCCTGCTGGGCCTACTGGGCCTGCTGGACCTGCTGTTTACAACAGGTTCTTGGGCCAAGGCCAGAGTGCCTCTGAGCCTGCAAGTTCCCATGGCTTATCTAGTGGAAAGGGTATGGTTCCAGAACAAGCAGAATCTGGTCTTCCTTGTGATAATCAAGGACAATACAAGGTTCTTCTGAAGCAGCAGGGAAATGTAAATGGTAAGAACGAAGAAAAAAATATGATAAACTCAACAACCACTAATCAATTGATTCTTGAGAAGGCTGACCAACAGAGGGTGTCTCCATGGGAGAATGACTGGGAACATAAAAAGGAAGTTGATTTGAGGAGGAGAAAATTGGGGGTGGAACCGTATTCTCAGGCTTCTGCCAACCAAGAAGCTCAATCTTCTGAAAGTATGAAAGCCAAATCTCATGGAAACACGAGGACTGGTGATGGGTTACTAGAAAAATCGGATGCTGCTTCTTCTGGTTTCTCTGAAGTTCCCAAATCACTGGTTACTTCTGCAAAAGATTCAAGTCTGATTCAGAAGATAGAGGGATTAAATGCAAAAGCACGGGCTTCTGATGTGCGACATGATGGTGCCCCTATTTGTAGCAGGGATGAGCCAGATGAGTTTCAATCTGATGATAAGCACTCTGATCCTTTTGTTGCCCATGAAGTGGGTGTGAGTGCTGTTTTTCCTGAAAACAGAGATTTTAAAGAAGTCGTAGATCCTGCCTCCAGTGAATTAAGCTTGTCCACTGTAGATAGGAACGTTAAATTTCATGGTGGAGCACCTGTCCACAGGAGGCCTAATCGTGGAATGCAAGGGAGAAGTGATCATCATGGCCGAGGAAAAGGCAATGCACAGGAGGTAGATGGGTGGCATAAAAGACCTCTGTTGGACTCCCCAGGCATGATGGCAACTCCCAACCAGGAAAGTTTGGTGCTTGACAGGGACCACAATGCTTTAGGAGCTATCAATAAGGCCAAGCCATTTTCTTCAGATAGCCTTGGAGATGGGCCTGCCCCATCCATAGGTGATTCAAAAGATAGTCAAGCTCAGCGTACAAAGATGAGAGAGCTAGCAAAGCAACGCACCAAACAATTGCAGGAGGAAGAGGAGGAAAGGACTAGAAAACAGAGGGCTAGGGCCTTGGCAAAACTTGAAGAGTTGAACAGACGTACAGTAGCTGGGGAGGGGCCAAATCAGTGGTCTGACACTAATAATGATGCTATAAGAAATAAGATAGAAGAACCTCGCAATCCCAGTAATTCAAGAACGCTTGGTACTATATCTGGAGAGCATACCACAGTTTCTGATCTACATGTGGCTACTAATGATAGCGAGTCAACTGTGGGCACTAATAAAAATTCTCCCATTGTATCAGGAGATACATCATCGAAGAAACCAAGTAATGGCAATAAGGAACAGGTTGTGGCACATAATGAATTGAGATCTTTGGAGCAGGAGGTAAGTATTTCTGATGCTGCTCAAAATAAGAATGCTTCTGAGGTGAATGGGGGCAGTGCATCCTTGAAGCACAAGCGTACAGGAAATAAACAAAAACCAAATATTCCATCGGAAAAGATTCCCCATTTAATTAAGGAATCAAAAGGTCATTTCGTTGTAGCTGACATTCATACAGTTGCAGAGGAGTCGAGCAATATCATTACAGATTCTGTTGCTGAATTTTCAACACATACAAAAAAGAAAAATAACAAGAGTGGGAAGAACAGGCACAAAGTGGAAGAGGCCTTGATAACTGCATCATCACCTCAGATTTCAAAAGAAACAGATCTTATAACGGAATCTGATAAACCAAAGGCTTCTCAATCTGTAATGGATCCACCTTCAGATCCACAACAGCCAATTAATAGAGATGAAAATCAGTTCAGAGAGCAGCAACCTCTGTTACCAGTTGTAGAGACCCTTGGCAAAGGTAACGGTCAGTGGAAGTCTCAGCATTCTCGCAGGATGCCAAGAAATGCTCAAAATAGACCAGGAGAAAAGATCCATGGCAATGATTCTGTTGTCTGGGCCCCTGTGAGATCTCTCAACAAATGTGAGGTTACCGATGAAACTATTCAGAAGAGTGAAGCAGAGTCTGTTGCTTCATCTGTAAAGACTGACAATCAAGTGCAGAATATTCCAAAAAATAAGCGAGCTGAAAGGGAGATATATGTACCGAAACCAGTAGCCAAAGAAATGGCGCAGCAAGGAACTATCCATCAAGATATTTCCTCTATGAACCAGGCACCTGATGATAATAAGGCAGATTCTAGTTCTCAAAGTTCTGATAATACTAGATCTGCTGGTGCTGTTTCTGTCAATGTGGGATTTTCCACAGATCACAGGAACGGGGATGGCAGGCACCATAAACAAAGCAAGGCACATTCATCATGGCGACAACGGGGAGCAACAGAATATGGGCAAGGCTTACAAGATCAATCTTCTTATGTTTCAAATGCTGGTAGTTATGTTCAAAAGTCAATTGAATATCAATTACCTGAGAAGGCTACCGGAAGCTCTGCCAATGAGTTCGCTGGTCTGGTTGATGAGTGGGATCCACCTGATGGATGGAATGATCCCAACTATTCAGCCTCTATCCAACCTGTCACTGCAGCTGTTGGGAGAGACCAGGGAGTGACAGGCAGGGGAAAACGATCCCAATCTAAGGGAAACAAGGCTGTAGGGAACAATTATGATTTAAATGAAAAGAAACTTAGAAGTGGAGACAACGAAAAAATTTCTTCTGGATCTGAAGTGCTCGAGGCAGATCAAAAAGATGTATCTGCTGCTGCTGCTAAAGAAATTCGGGGTGTTGGGGAACGTTCAACATCTCATTGGCAACCCAAATCGCGGATGGTCCAACCTCTCAGTAATCAAAATGTTGATGCTGAAGCTGCACAGGCTAATAAAATGGGACCTAGACAATCCTCACATCGCACAAAAACAAGTGATGATGTGGCCCAAAACCAGTATGATATGTCCACTGGTGCAAGAACCATCACAGAAGAGGGATCAATTGCTGGTCATCATGGGGCCAGGGGAGAGAAGAAAATTTCTTCCCGCAAGGAGCGTCCTTACTCCCCAAACCAAGGGCCTACCCATACAGTAGAGGTTGCTCCTGCAAATACAGATGTCAGACGTGAGCAACAGTTGCCTACGTTTTACCATAAAAGTGGTGAGAACAATAACCGTTATGGGAGAGGGTCGGAATCTCGTTGGGAAAGGAATAACTCTCAACATCATAAGCAGCAGCATTATCCACCTGCTAATAGAGACAGGCAAAGACAAAATCTGCAGTACGAGTACCAACCAGTTGGGCCACACAATAGTAAACCGAACATGGACAGACCTAAGGATACGACTCAGCATTCAGGCTCAAGGTACGTGGAGAGGGGCCAAGGGCAGTCCAGAAGAGATGGTGGGAACTTTTACAAGCAACAAGGTGGACCAGTCGATCTTCTATGGATCAGGGCAGTAGGACTAGGAACCCGATTTGACGGTGCAGGAGAAAACTGTTTGGAGTTGGATGGAGGAGGATGGTCGGACTTGTTTATTTTGGACTCGCTTTTTCTTCAATTCTATCCAGTACCTCATGGATTCCACTGCTCTGGTGTCTTAAAAGAAACTTTGACCAGTCTCCAAATGTCATCCAATGCCACAATGCTTGGACTTGTTTTTCACCATCCTACATGCACGAAATCTAGAGGTTCCATTACGACAACCTCGAGCCTTTTATCATGGAGCCAAGGATTGAAGTTGAAGCAATGTATAAAGACTTCAAAATTTTTTGGGAAAGCTGATAGGTGTATACTGTTAAAGCAAAAGATCCAGTTAAGTGTAGGGCCTCCGTCCAGATGTGGATCAAAATTTAAGCTTTTGAGAATATCAGCCTTCAAAAACAGCGTTCCAAATGGTGAACCTAGGAATGGAGAAAATCTGTCTGAAGTACCAAAGGATACAAGAGAAGATGGTGATGTTTCATCAAAAGTTACTTTGAAAGAAAATAATGTTGTATTATCTTCTACATCTGGAATAGTCAATTGGATTGCACCACACCCTTTTATTAATAAATTATTCAGGAAATGGCCGACAATGTTATGTAATCAACAAGCAAGTGAAGAAGTGGATGGGTTTTTGGGAAGGATGTCCTTGAGTGAGAATTCAGCAACTCTACAAGAGGCTCATAATATGAAAAGACGTGAGAGCTTAGAAGCACTTTGGTACTACTTTCTCAGTCTGGATACCATGATTAAAATCCCTCTGTTGATGTTTGTTCCCTTGTATCTGACAATCAAAATCTCTTATGGAGCCCAAGTTTCAAAAGAACTGATGCCTTTGTGGGTGTTTGGGCCATTCATTGTAGCTTTCTACATCAAGATGTTTCGCTGGTTGTGTTGTCTCTCAATCTTGAGCTTCAAGCAAACTGCATATTTGATGAAAAACTTTCCCTGTTATTACAAGCTAGCCTGTGACTATGTTTCCCATGGGAGACTTAAAGAGGCGATACAAGCTCGGGTCTGGGAACCTGTAGTGGATATTAGGAACCTCCATGATAAAGAGTTGTCGAGAAGAAAGTTCAAATTTATGCAAGAATGGATTATGGAGAGGTACCTGGAATTTCTAGAATTACTTGGGGTAGTTAAAAATGTAGCCGGAGCTGTTAAGTTCTATGATACTTGTAAGGCTGCTTCACTATTTCCAAATGTTTTGAAGAGGCCTCTCTTTGTATCAATTTCATTATCATTTTTGGCTCTCCTTTCTGTAGACTGTTCATGA 5988 43.75 MTSSMLSGERRWTSARRGGMTVLGKVAVPKPINLPSQRLENHGLDPNVEIVPKGTLSWGNKSTSSATNAWGSASVSPNTDSASGSPSHFCGRPSSAGGGTRPSTAGSDRSHEPHANAWGPSSRPSSASGPVTLSHASLTSLRPHSAETKSSSSQLSRFAETSENPVAWNSAVTTEKVGTLPCKSDGFSLTSGDFPTLGSEKESVGKDAESQDNRSNGGATMKERTETSAIDDPKNVTTSVASANSWRSDNLPHNDDGSRPNVEKWLGHPQPYPGANIPPPHYDAWHGSPVNNPQGGVWYRGPPQGGPPYRTPVAPGNFPLDPFMYYPPQIPPGGLPNPQPPHGTGPRGHHPKTGDIYRPPMHDGFIHPGMSIRPGFYPGPVTYDGYFRPPMGYCNSNDRDAPFMGLPAGPTGPAGPAVYNRFLGQGQSASEPASSHGLSSGKGMVPEQAESGLPCDNQGQYKVLLKQQGNVNGKNEEKNMINSTTTNQLILEKADQQRVSPWENDWEHKKEVDLRRRKLGVEPYSQASANQEAQSSESMKAKSHGNTRTGDGLLEKSDAASSGFSEVPKSLVTSAKDSSLIQKIEGLNAKARASDVRHDGAPICSRDEPDEFQSDDKHSDPFVAHEVGVSAVFPENRDFKEVVDPASSELSLSTVDRNVKFHGGAPVHRRPNRGMQGRSDHHGRGKGNAQEVDGWHKRPLLDSPGMMATPNQESLVLDRDHNALGAINKAKPFSSDSLGDGPAPSIGDSKDSQAQRTKMRELAKQRTKQLQEEEEERTRKQRARALAKLEELNRRTVAGEGPNQWSDTNNDAIRNKIEEPRNPSNSRTLGTISGEHTTVSDLHVATNDSESTVGTNKNSPIVSGDTSSKKPSNGNKEQVVAHNELRSLEQEVSISDAAQNKNASEVNGGSASLKHKRTGNKQKPNIPSEKIPHLIKESKGHFVVADIHTVAEESSNIITDSVAEFSTHTKKKNNKSGKNRHKVEEALITASSPQISKETDLITESDKPKASQSVMDPPSDPQQPINRDENQFREQQPLLPVVETLGKGNGQWKSQHSRRMPRNAQNRPGEKIHGNDSVVWAPVRSLNKCEVTDETIQKSEAESVASSVKTDNQVQNIPKNKRAEREIYVPKPVAKEMAQQGTIHQDISSMNQAPDDNKADSSSQSSDNTRSAGAVSVNVGFSTDHRNGDGRHHKQSKAHSSWRQRGATEYGQGLQDQSSYVSNAGSYVQKSIEYQLPEKATGSSANEFAGLVDEWDPPDGWNDPNYSASIQPVTAAVGRDQGVTGRGKRSQSKGNKAVGNNYDLNEKKLRSGDNEKISSGSEVLEADQKDVSAAAAKEIRGVGERSTSHWQPKSRMVQPLSNQNVDAEAAQANKMGPRQSSHRTKTSDDVAQNQYDMSTGARTITEEGSIAGHHGARGEKKISSRKERPYSPNQGPTHTVEVAPANTDVRREQQLPTFYHKSGENNNRYGRGSESRWERNNSQHHKQQHYPPANRDRQRQNLQYEYQPVGPHNSKPNMDRPKDTTQHSGSRYVERGQGQSRRDGGNFYKQQGGPVDLLWIRAVGLGTRFDGAGENCLELDGGGWSDLFILDSLFLQFYPVPHGFHCSGVLKETLTSLQMSSNATMLGLVFHHPTCTKSRGSITTTSSLLSWSQGLKLKQCIKTSKFFGKADRCILLKQKIQLSVGPPSRCGSKFKLLRISAFKNSVPNGEPRNGENLSEVPKDTREDGDVSSKVTLKENNVVLSSTSGIVNWIAPHPFINKLFRKWPTMLCNQQASEEVDGFLGRMSLSENSATLQEAHNMKRRESLEALWYYFLSLDTMIKIPLLMFVPLYLTIKISYGAQVSKELMPLWVFGPFIVAFYIKMFRWLCCLSILSFKQTAYLMKNFPCYYKLACDYVSHGRLKEAIQARVWEPVVDIRNLHDKELSRRKFKFMQEWIMERYLEFLELLGVVKNVAGAVKFYDTCKAASLFPNVLKRPLFVSISLSFLALLSVDCS 1995
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28625398 28639030 - CmPI595203_06g017580.1 Cmu06g1758 419418

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 180 280 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 987 1027 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 56 90 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 815 878 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 753 783 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1406 1547 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1471 1493 - -
Cmu06g1758 1995 CDD UDM1_RNF168_RNF169-like 753 795 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 231 251 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 822 878 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1148 1214 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1046 1074 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 119 163 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 524 545 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 522 566 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1306 1323 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1705 1730 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 54 163 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 661 691 - -
Cmu06g1758 1995 PANTHER PROTEIN MODIFIER OF SNC1 1 1 1549 IPR038808 GO:0040029(PANTHER)
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 896 915 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1716 1730 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1048 1062 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1276 1394 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1494 1510 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1412 1427 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 673 691 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1006 1027 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 331 345 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 896 928 - -
Cmu06g1758 1995 Pfam BAT2 N-terminus 13 135 IPR009738 -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 427 456 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1450 1470 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1285 1299 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 729 783 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1347 1394 - -
Cmu06g1758 1995 Coils Coil 756 795 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 331 355 - -
Cmu06g1758 1995 MobiDBLite consensus disorder prediction 1148 1183 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1758 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1287 Cmu-Chr1:25442640 Cmu06g1758 Cmu-Chr6:28625398 7.40E-71 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g781 . . . . . . . . . . Cma10g00119 Cma11g00088 Car10g00106 Car11g00079 Sed08g0103 . Cpe04g01566 Bhi02g00478 Tan09g2266 Cmetu02g1512 . Hepe09g0213 . . Cla06g01673 Cam06g1861 Cec06g1911 Cco06g1916 Clacu06g1817 Cmu06g1758 Cre06g2575 . . . . . . . . . Blo15g00262 . . Bpe07g00848 . . . . Cmo10g00123 Cmo11g00088 . . . . . Cpe18g00849 . . . . . . . . . . . . . . Lsi06g01564 Csa01g00136 Chy02g02591 Cme02g01988
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006102 0 1 1 0 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 5 1 1 39