Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1790 ATGGAGACTCTTCTTCATTATCTTCTTCCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACTTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCCCGCCTCCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCATCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTGGCCACAAGCTTCTTTACAGCTCCAGAGACATAGCTGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTATAAGGGAAGAAGAAGTCAAATTCATGATCGAGAAGATCCAACACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACTAACAATGTAATTTGCAGAGTGGGTTTAGGGAGAAAATATGGAGAGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATCGGAATTTGGGCAATTATTGGGGAGTTTTAGCATTAGAGATTTCATTCCTTGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAACTGAAGAATGAAATTAAAGAAATAAAAGGTGATCACAAATGGTGCTATGTAAACGAGGATGATTTAGACAAAATGGTATATTTAAAGGCAATAATCAAAGAGACATTGCGACTACACCCACCCATCCCACTTCTCGTTCCGAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGACATTAAACGTGGGACTCGAGTTATGATCAATGCATGGGCAATCGGAAGAGACCCAAAATTATGGGAAGAAGCAGAGGAGTTTCGACCAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGTGCAGGGAGAAGAGGATGTCCTGGAATTGTATTTGCAACTATGATTAATGAGATAGCTTTAGCAAATTTGGTGCATATGCTTGAGTGGATATTGCCAAATGGTGAGGATTTGGACATGACAGGAACCTTTGGTTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACCGCAATTCCTAACAAGGAATGA 1524 42.32 METLLHYLLPLQLSLHSISFTIFILILIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARLHGPLFLLRLGSVPTIIVSSSDLARDIMKTHDLVFANRPKSTIGHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSIREEEVKFMIEKIQHNPVSVNLTEIFSGLTNNVICRVGLGRKYGEGEDGKKFMDLLSEFGQLLGSFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLQMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKGDHKWCYVNEDDLDKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLRGYDIKRGTRVMINAWAIGRDPKLWEEAEEFRPERFMNNSIDFKGQDFELIPFGAGRRGCPGIVFATMINEIALANLVHMLEWILPNGEDLDMTGTFGLTIHRKFPLVATAIPNKE 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28906888 28908984 + CmPI595203_06g017900.1 Cmu06g1790 419450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1790 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 Pfam Cytochrome P450 43 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 FunFam Cytochrome P450 83B1 30 501 - -
Cmu06g1790 507 SUPERFAMILY Cytochrome P450 43 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PANTHER CYTOCHROME P450 71B11-RELATED 21 501 IPR050193 -
Cmu06g1790 507 Gene3D Cytochrome P450 37 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 CDD CYP71-like 73 498 - -
Cmu06g1790 507 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu06g1790 507 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0926 Cmu-Chr3:3925718 Cmu06g1790 Cmu-Chr6:28906888 6.00E-125 dispersed
Cmu03g0930 Cmu-Chr3:3954698 Cmu06g1790 Cmu-Chr6:28906888 4.60E-100 dispersed
Cmu03g0931 Cmu-Chr3:3969522 Cmu06g1790 Cmu-Chr6:28906888 9.50E-60 dispersed
Cmu05g2649 Cmu-Chr5:35091294 Cmu06g1790 Cmu-Chr6:28906888 1.60E-106 dispersed
Cmu05g2650 Cmu-Chr5:35093732 Cmu06g1790 Cmu-Chr6:28906888 5.80E-112 dispersed
Cmu06g1790 Cmu-Chr6:28906888 Cmu07g1436 Cmu-Chr7:29529711 6.40E-100 dispersed
Cmu10g2469 Cmu-Chr10:31298413 Cmu06g1790 Cmu-Chr6:28906888 2.10E-77 dispersed
Cmu11g0031 Cmu-Chr11:802879 Cmu06g1790 Cmu-Chr6:28906888 8.90E-70 dispersed
Cmu07g1171 Cmu-Chr7:27008872 Cmu06g1790 Cmu-Chr6:28906888 6.80E-14 transposed
Cmu03g0924 Cmu-Chr3:3894357 Cmu06g1790 Cmu-Chr6:28906888 7.80E-110 wgd
Cmu05g2641 Cmu-Chr5:35021372 Cmu06g1790 Cmu-Chr6:28906888 4.80E-108 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1790 - - - 0.0