Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu06g1810 | ATGGGGAAGAAGACGAAGAAACCCGGAAAGGGAAAAGAGAAGACTGAGAAGAAAACGGCCAAAGCCGAGGAAAAGAGAGCTCGCAGGGAGAGCAAGAAGCTCTCTCCTGAGGATGATATTGATGCAATTCTCTTGAGTATACAAAAGGAGGAAGCGAAGAAAAAGGAAGTTCATGTTGAGGAGAATGTCCCTGCGCCATCTCCTCGGTCCAATTGTTCGTTGACTATCAATCCCTTGAAAGAAACAGAGTTGATCCTTTATGGGGGTGAATTTTACAATGGTACCAAGACATATGTCTATGGTGATCTGTATCGGTACGATGTTGAGAAACTAGAGTGGAAAGTAATTTCAAGTCCCAATAGCCCCCCTCCTCGTAGTGCTCATCAAGCTGTTGCTTGGAAAAATTACCTCTATATTTTTGGTGGAGAGTTTACATCTCCTAACCAAGAGAGGTTTCATCACTACAAGGATTTCTGGGTGCTGGACCTGAAAACAAATCAATGGGAACAAATAAATTTGAAAGGTTGTCCTAGTCCACGCTCTGGTCATCGGATGGTCTTGTACAAGCACAAAATTATTGTTTTTGGTGGGTTCTATGACACTTTAAGGGAAGTGAGATACTATAACGACATGTACGTGTTTGATCTGGATCAGTACAAGTGGCAAGAAGTAAAGCCTAGTCCTGGTGCAATGTGGCCTAGTCCTCGAAGTGGTTTCCAATTTTTTGTTCAGCAAGATGAGGTTTTCTTGTATGGTGGCTATTTTAAAGAAATTCAATCTGATAAGAACACTTCTGAAAGAGGAGTTGTGCATGCAGACATGTGGTCCCTTGATCCGAGGACTTGGCAATGGAATAAGGTAAAGAAAGGTGGGATGCCGCCTGGGCCTCGTGCAGGGTTCTCCATGTGTGTTCATAAGAGGCGAGCCTTGCTATTTGGGGGAGTGGTGGACATGGAAGTTGAAGGTGGCGATGCAATGATGAGTCTATTCTTGAATGAACTCTATGCATTTCAAATAGACAACCATAGATGGTATCCTCTAGAGTTAAGGAAGGAGAAGTCGACAAAGGCAAAGATTAAAAAAATTTCTGAGCAAAAGAACAATGAGGTTGCGTTTGATGATAATATAAATGAGGAGGTTGTTGACGTTGGTAAAATTGAAAATCCAGTCATGGAAGAAGCATGCAACATGGAAACTGACATTGATGAAATATCTCATCATATATCTTCATCTGTGTCCATTAACAACGGTGGATTGGAAATGAGTTCTGGCAACAAACAACAAGAATCTGGTTCGAACGAAAATGCTGTTTTGCCAGAGGTGATTAAGCCCTGTGGACGTATTAACTCCTGCATGGTTGTTGGAAGAGATACACTGTACATCTATGGGGGTATGATGGAGATTAAAGATCGAGAAATCACCCTTGATGACTTGTATGCTCTCAATCTCAGTAAACTTGATGAATGGAAGTGCATTATACCGGCCACGGAATCTGAATGGGTAGAAGCCTCGGAGGATGAAGATGAGGAAGATGATGAAGATGACAGTGAGAATGATGACAATTCTGAAGGAAGCAATGGAAGTGATGAGGATGATAGTGATGAGGAGGATTTTGAGGCTGGAAATAATGGATCACGAAAAGTAGGAGATGCTGTAGCTTTAATTAAGGGTGAGGGCAGGAATCTCCGTAGGAAAGAGAAGCGGGCGAGGATCCAACAAATCAGAGCTAACCTTGGGCTTTCAGATTCACAAAGAACTCCCATGCCTGGAGAATCTCTAAGGGAGTTCTATAAACGTACAAATCTATATTGGCAAATGGCGGCACATGAGCATACACAACATACTGGAAAGGAACTTCGCAAGGACGGATTCGATCTTGCTGAATCTCGTTACAGGGAGCTTAAACCTATCCTTGATGAGCTTGCCATATTGGAGGCAGAGCAGAAAGCAGAAGAAGCAGAAGCTCCTGAAACTAGTTCAAGAAAAAGAGGCAAGAAGAAAAATAAAATTCGAATCTCCAAAACCCCAATCGGGTCACAGCGGCTCGTAGCCGGGTTCCGCAACTCGCAAATTACCAGAGCAATGAAGAAGAAAGCAACAGCAGGAACCATAATTCTTCTTTCACTTTTACTATCTCTACAAGATGTTGTTCATCTTGCTTTCGCTCTATCTCCTTTAGACAGCAATCAGGACGTGGAGCAATCTGCAACTTCAAGACCTCTTGAGCAAGACAAAGAGCATGTTGATGAAGTTCATTGTTCCAGAGAAAGAAGTAGGACAGCCTGGAATATCATTGAGGAGCATTTGCTGCCGTTTATGGAGAAAGAAAATTATCAGGTTTCAACCAAGTGTAGGCTTCATCCAAACAACGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTTGATAAGCATTTTGACAACAGACATAACAATCTTCTGAATGTTAGCTACGGGAAGTGCTTGGCTGATTTATGTGGGGCATTACATTGTGACCTAAAGATGGATATCAAGTCACGTAAATCTAAATGCAATCCTGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATAGCTGTTTTCCAATTAATGAGGGACCATCAGCAAACCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGGAAACAAAAGCCATTTTCTAGAGGAGCGGCGAGGCAACCCGGCATCTTCTACATGGCATCTTCAATACTGATTTTGATGCTGCTGCCAATTTTCTATGTCATTGTCTACTTACACCGCAGAGAATCGAGGAATGGAATCGAAGTGCTTAGACGAATCTCAAAAGCTGGACGTACATCCAAACCCTTGGTTGCATGGCTTTTCATCCACGGTTGTCTCATCGAGCTTGCTGGTTTAGTCATACTTTGCCGCTACTCCCATGAAGAGCAATCCTTTCTATGGATTAATCGGCAAGATTCTCATTGCCAGATGCATGATTAG | 3054 | 42.57 | MGKKTKKPGKGKEKTEKKTAKAEEKRARRESKKLSPEDDIDAILLSIQKEEAKKKEVHVEENVPAPSPRSNCSLTINPLKETELILYGGEFYNGTKTYVYGDLYRYDVEKLEWKVISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWVLDLKTNQWEQINLKGCPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYYNDMYVFDLDQYKWQEVKPSPGAMWPSPRSGFQFFVQQDEVFLYGGYFKEIQSDKNTSERGVVHADMWSLDPRTWQWNKVKKGGMPPGPRAGFSMCVHKRRALLFGGVVDMEVEGGDAMMSLFLNELYAFQIDNHRWYPLELRKEKSTKAKIKKISEQKNNEVAFDDNINEEVVDVGKIENPVMEEACNMETDIDEISHHISSSVSINNGGLEMSSGNKQQESGSNENAVLPEVIKPCGRINSCMVVGRDTLYIYGGMMEIKDREITLDDLYALNLSKLDEWKCIIPATESEWVEASEDEDEEDDEDDSENDDNSEGSNGSDEDDSDEEDFEAGNNGSRKVGDAVALIKGEGRNLRRKEKRARIQQIRANLGLSDSQRTPMPGESLREFYKRTNLYWQMAAHEHTQHTGKELRKDGFDLAESRYRELKPILDELAILEAEQKAEEAEAPETSSRKRGKKKNKIRISKTPIGSQRLVAGFRNSQITRAMKKKATAGTIILLSLLLSLQDVVHLAFALSPLDSNQDVEQSATSRPLEQDKEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYQVSTKCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDNRHNNLLNVSYGKCLADLCGALHCDLKMDIKSRKSKCNPAAAARNKHLCESLADSCFPINEGPSANRLHELFLHQFCGAHSCTGKQKPFSRGAARQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKAGRTSKPLVAWLFIHGCLIELAGLVILCRYSHEEQSFLWINRQDSHCQMHD | 1017 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29005680 | 29022202 | - | CmPI595203_06g018100.1 | Cmu06g1810 | 419470 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu06g1810 | 1017 | Pfam | Galactose oxidase, central domain | 190 | 239 | - | - | |
Cmu06g1810 | 1017 | Pfam | Galactose oxidase, central domain | 246 | 305 | - | - | |
Cmu06g1810 | 1017 | Pfam | Galactose oxidase, central domain | 134 | 188 | - | - | |
Cmu06g1810 | 1017 | PANTHER | KELCH DOMAIN-CONTAINING PROTEIN | 1 | 663 | IPR052588 | - | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 649 | 672 | - | - | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 738 | 752 | - | - | |
Cmu06g1810 | 1017 | Pfam | Kelch motif | 444 | 484 | - | - | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 12 | 37 | - | - | |
Cmu06g1810 | 1017 | Pfam | Domain of unknown function (DUF4110) | 579 | 663 | IPR025183 | - | |
Cmu06g1810 | 1017 | Gene3D | - | 46 | 375 | IPR015915 | GO:0005515(InterPro) | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 497 | 551 | - | - | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 733 | 752 | - | - | |
Cmu06g1810 | 1017 | Coils | Coil | 12 | 32 | - | - | |
Cmu06g1810 | 1017 | Pfam | Galactose oxidase, central domain | 68 | 122 | - | - | |
Cmu06g1810 | 1017 | MobiDBLite | consensus disorder prediction | 500 | 538 | - | - | |
Cmu06g1810 | 1017 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 810 | 831 | IPR013087 | - | |
Cmu06g1810 | 1017 | SUPERFAMILY | Kelch motif | 82 | 491 | IPR015915 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g1385 | Cmu-Chr5:17598750 | Cmu06g1810 | Cmu-Chr6:29005680 | 1.10E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu06g1810 | - | - | - | 0.0 |