Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1813 ATGGCGAGAGTTAACGACAATTGGGAGAGGCTAGTGCGTGCGACTTTGAAGAGAGAGCAGCTCAGAAATGCAGGGCAAGGCCATGGGAGGACTCCCAGTGGGATTGTTGGAGCTGTACCACCCTCTCTTGGAAAAACCACAAACATTGACGCTATTTTGCAGGCTGCCGATGAAATCCAAGCGGAGGACTCCACTGTTGCTAGGATTTTGTGTGAGCAGGCGTACAGAATGGCACAAAACTTGGATCCCAACAGCGATGGTAGAGGTGTTCTTCAGTTCAAGACTGGATTGATGTCTGTTATTAAGCAAAAACTTGTAAAGAAGGATGGGGCATCTATAGATCGTCATCGTGATATTGAACATCTGTGGGAGTTCTACAAGCAATATAAGAGACGACATAGAATAGATGATATACAGAAAGAAGAACAGAAATGGCGGGAGTCAGGAGTAATGAGTGCTAACTTGGGAGAGTTGGAGCTTAGATATTCTGAAGCGAAGAAAGTAATTGCTAACCTAAGGGCTTTAGTTGAGGTGATGGAGGCCCTCAGCGGAGATGCAGATCCTCAAGGAGTTGGAAGATTGATTATGGAGGAGCTACGAAGAATTAGAAGTTCTGATACTACATTATCGGGAGAATTTGTACCCTACAATATTGTCCCCTTGGATGCACAATCACTAACAAACGCCATTGGCATTTTCCCTGAAGTTAAGGCTACAATATCTGCAATCAGATATACAGAGCATTTCCCTAGACTGCCTTTGGAATTTCAGATATCTGGACAAAGGAGTGCAGATATGTTTGACCTTCTTGAATATGTATTTGGATTCCAGGGGGACAACATAAGAAATCAACGAGAGCATGTGGTTCTCATGGTAGCAAATGCTCAATCTCGTCTTGGCATACCTAATAATGCTGATCCGAAAATAGATGAGAAAGCAGTCAATGAGGTTTTTTTGAAGGTGCTTGATAACTACATCAAGTGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTAGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTTCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCACCATATGGCAAAAGAATTGGATGCTATACTTGATCATGGAGAAGCAATTCCTTCTAAAAACTGTATGCTGGAAGATGGTTCTATGTCTTTCCTCCAACGAATCATTTGTCCTATCTACGAGACACTTGTAGCCGAAACTGAAAGAAACAAAAATGGGAAAGCTGCACATTCAGCATGGAGGAACTACGATGATTTCAATGAATACTTTTGGTCACCTACTTGCTTTGAATTGGGCTGGCCAATGAGGAAGGAATCAAATTTTTTACAGAAGCCTAGAGGCTCGAAACGGACTGGCAAGACTTCTTTTGTTGAGCATCGCACATTTCTTCATTTGTATCGCAGTTTCCACCGTCTCTGGATCTTTTTGGCAATTGTATTCCAGGCTCTGACAATTTTTGCCTTCCACAATGAGCGTATTAATTTGGACACTATCAAAGCTATTCTTAGCATTGGGCCAACATTTGCAATCATGAACTTTATTGAGAGCTCCTTAGATGTATTGCTTACTTTTGGGGCATACACGACTGCAAGAGGAATGGCTATATCAAGGATTGTTATTAGGTTCTTCTGGTGGGGATTAAGTTCAGTTTTTGTGACTTATGTTTATGTGAAGGTTCTTGAAGAAAGAAATACTCGAAGCTCAGATAATTCATTCTATTTTCGAATATATATTATAGTATTGGGTGTTTATGCTGCTTTACGCCTTGTGGTTGCAATGTTGCTGAAGTTACCTGCATGCCATACTCTTTCTGAGATGTCAGATCAGTCTTTTTTTCAATTTTTCAAATGGATCTATCAGGAACGTTATTTCGTCGGTCGTGGCCTATATGAAAAACCAAGTGACTATTGCAGATATGTAGCCTTTTGGTTAGTGCTCTTGATTTGTAAATTTGTTTTTGCTTACTTTCTCCAGATTCAACCACTTGTCCAACCAACCACTATTATTGTCAACCTTCCATCTCTTGAATATTCATGGCATTCTTTCATTTCGAAAAATAACAATAATGTGTCGACTGTAGTTAGTTTATGGGCTCCTGTTGTGGCTCTCTATCTGTTGGACATTTACATATGGTACACACTCTTGTCTGCCATCATTGGTGGTGTAAAGGGTGCTCGGGGTCGTTTGGGAGAGATACGATCACTTGAAATGATGCACAAACGTTTTGAGAGCTTTCCAGAAGCATTTGTGAAGAACCTTGTCTCTACACAGACAAAAAGTTTGCCACCCACCGGACAAGCACCTCAGGACTCTCCGGATATGAGCAAGACATATGCAGCAATCTTTTCCCCATTTTGGAATGAGATCATTAAAAGTTTACGTGAGGAAGACTTTATTAGCAATAGGGAGATGGACTTGCTTTCTATTCCCAGCAACACAGGGAGCCTCAGATTGGTCCAATGGCCTTTGTTTCTTTTAAGTAGTAAGATATTCTTGGCTGTTGATCTGGCTTTGGATTGCCAAGATACGCAGACAGATCTATGGTACAGAATATGTCGGGATGAATATATGGCATATGCAGTTCAAGAATGCTACTATAGTGTTGAAAAAATCTTATATGCCCTTGTCGATGGTGAAGGGAGACTTTGGGTTGAAAGGATATTTCGGGAGATTACCAATAGTATTTCAGAGGGCTCGCTGGTTATAACATTGAACCTTAAGAAGATTCCAATTGTGTTACAAAAGTTTACGGCGCTTACAGGGCTTTTGACTCGAAATGAAACTCCTGAACTTGCTAGAGGTGCTGCAAAAGCTGTATTTGAGCTTTATGAGGTTGTTACCCATGACCTGCTTTCATCAGATTTGAGGGAGCAGCTTGATACATGGAATATCTTGTTGAGGGCAAGAAACGAAGGTCGCCTTTTTTCTCGGATTCAATGGCCCAAAGATTTGGAAATTAAAGAGCTTGTGAAGCGTCTGCATTTACTTCTTACCGTGAAGGACTCTGCAGCTAACATCCCAAAAAATCTTGAAGCAAGAAGAAGACTACAGTTTTTTACAAATTCATTATTTATGGACATGCCTTCGGCAAAACCTGTCAGTGAAATGGTGCCGTTCAGCGTCTTTACTCCATACTACAGTGAAACTGTGCTTTATAGTTCCTCTGAAATACGAATGGAAAACGAGGATGGCATATCCATTCTTTTCTATCTTCAGAAGATTTTTCCAGATGAATGGGAGAACTTTTTGGAACGGATTGGTCGAGGTCATGCCACTGGGGAAGCAGAGCTCCAAAAAAGTCCAAGTGATGCATTGGAGCTTCGATTTTGGGTTTCTTATAGAGGGCAGACCCTAGCTCGGACAGTTCGTGGTATGATGTACTACAGAAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGATGATTATTCTCAAACGAACTTTCCCACGAGTCAGGGCTTTGAGTTATCTCGAGAATCAAGGGCACAAGCAGACTTGAAGTTTACTTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCAGAGGCTGCTGATATTGCTCTTTTGCTGCAGAGGAATGAGGGACTTCGTGTTGCTTTCATTCACGTGGAAGATAGTGTTGCATCTGACGGTAAGGTTGTAAAGGAATTTTATTCGAAGCTTGTGAAAGCTGATATACATGGAAAAGATCAGGAGGTATATTCGATCAAACTTCCTGGAGAACCAAAGCTAGGAGAAGGAAAACCTGAAAACCAAAACCATGCTATAGTTTTCACTCGTGGAGATGCTGTTCAAACTATTGACATGAACCAGGACAACTATCTTGAAGAGGCATTGAAAGTGAGAAATCTTCTGGAGGAATTTCATGGAAAGCATGGGCTTCGCCCTCCTACCATCTTAGGCGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCGTTAGCGTGGTTCATGTCCAATCAGGAAACTAGCTTTGTAACCTTAGGACAACGTGTCTTGGCAAGTCCTCTCAAGGTCCGAATGCATTATGGGCATCCTGATGTGTTTGACCGTATATTTCATATAACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACACACCACGAGTACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAAATAGCCCTGTTTGAAGGGAAAGTAGCTGGTGGGAATGGAGAGCAAGTTCTCAGCAGGGATGTTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTTTCGTTTTATTTCACAACTGTTGGTTACTATGCATGTACAATGATGACAGTTCTTGTGGTTTACATTTTCTTGTATGGACGGGTTTACTTGGCCTTTGCTGGACTTGACGAAGCAATCTCAAGAAGAGCAAAAATGTTGGGAAACACAGCATTGGATACTGCACTGAATGCTCAGTTTTTGTTTCAGATTGGAGTTTTTACAGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTGCTGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTACAGTTATGTTCCGTCTTCTTCACATTCTCGTTGGGGACTAGAACTCATTATTTTGGACGAACCATTCTCCATGGTGGTGCCAAGTATCGAGCAACTGGCAGAGGCTTTGTGGTCCAGCACATCAAATTTGCTGAAAATTATCGCCTCTACTCAAGAAGTCATTTCATCAAGGCGCTTGAGGTGGCATTGCTTCTTATTGTCTACATTGCGTATGGGTATTCAGAAGGAGGTGCAAGTTCTTTTGTTTTACTTACTCTCAGCAGTTGGTTCCTCGTCATTTCGTGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGACGATTGGACGAGCTGGCTATTCTACAAAGGTGGAGTAGGGGTTAAGGGAGAGAACAGCTGGGAATCATGGTGGGATGAGGAACAGGCACATATTCAAACATTCCGGGGTCGAATATTGGAGACAATCTTGACTGTGAGGTTCTTCCTATTTCAATTTGGAATTGTGTACAAGCTCCATCTCACAGGAAAGGACACATCACTTGCGTTATATGGTTTCTCGTGGGTGGTGCTCGTTGGGATTGTTTTGATATTCAAGATCTTCACCTTCAGTCCTAAAAAATCAACGAACTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATTGTACTGGTTACAGCTCTTGGTCTAATTGTTGGCTTTACTAACCTATCGATAACCGATTTATTTGCAAGTCTTCTGGCATTTATTCCTACTGGATGGGCTATATTATGTTTAGCAGTTACTTGGAAGAAAGTGGTGAGAAGTCTAGGCTTGTGGGACTCGGTACGTGAATTTGCCAGGATGTATGATGCTGGGATGGGATTAATAATATTCGTGCCCATCGCATTCTTATCCTGGTTTCCATTCATTTCCACGTTCCAGTCTCGTCTGCTCTTCAACCAAGCTTTCAGCCGTGGGCTTGAGATCTCCCTCATCCTTGCTGGAAACAAAGCAAACGTCGAGACATACTGA 5721 41.86 MARVNDNWERLVRATLKREQLRNAGQGHGRTPSGIVGAVPPSLGKTTNIDAILQAADEIQAEDSTVARILCEQAYRMAQNLDPNSDGRGVLQFKTGLMSVIKQKLVKKDGASIDRHRDIEHLWEFYKQYKRRHRIDDIQKEEQKWRESGVMSANLGELELRYSEAKKVIANLRALVEVMEALSGDADPQGVGRLIMEELRRIRSSDTTLSGEFVPYNIVPLDAQSLTNAIGIFPEVKATISAIRYTEHFPRLPLEFQISGQRSADMFDLLEYVFGFQGDNIRNQREHVVLMVANAQSRLGIPNNADPKIDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSLEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAILDHGEAIPSKNCMLEDGSMSFLQRIICPIYETLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMRKESNFLQKPRGSKRTGKTSFVEHRTFLHLYRSFHRLWIFLAIVFQALTIFAFHNERINLDTIKAILSIGPTFAIMNFIESSLDVLLTFGAYTTARGMAISRIVIRFFWWGLSSVFVTYVYVKVLEERNTRSSDNSFYFRIYIIVLGVYAALRLVVAMLLKLPACHTLSEMSDQSFFQFFKWIYQERYFVGRGLYEKPSDYCRYVAFWLVLLICKFVFAYFLQIQPLVQPTTIIVNLPSLEYSWHSFISKNNNNVSTVVSLWAPVVALYLLDIYIWYTLLSAIIGGVKGARGRLGEIRSLEMMHKRFESFPEAFVKNLVSTQTKSLPPTGQAPQDSPDMSKTYAAIFSPFWNEIIKSLREEDFISNREMDLLSIPSNTGSLRLVQWPLFLLSSKIFLAVDLALDCQDTQTDLWYRICRDEYMAYAVQECYYSVEKILYALVDGEGRLWVERIFREITNSISEGSLVITLNLKKIPIVLQKFTALTGLLTRNETPELARGAAKAVFELYEVVTHDLLSSDLREQLDTWNILLRARNEGRLFSRIQWPKDLEIKELVKRLHLLLTVKDSAANIPKNLEARRRLQFFTNSLFMDMPSAKPVSEMVPFSVFTPYYSETVLYSSSEIRMENEDGISILFYLQKIFPDEWENFLERIGRGHATGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDDYSQTNFPTSQGFELSRESRAQADLKFTYVVSCQIYGQQKQRKAPEAADIALLLQRNEGLRVAFIHVEDSVASDGKVVKEFYSKLVKADIHGKDQEVYSIKLPGEPKLGEGKPENQNHAIVFTRGDAVQTIDMNQDNYLEEALKVRNLLEEFHGKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISRRAKMLGNTALDTALNAQFLFQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLIVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQAHIQTFRGRILETILTVRFFLFQFGIVYKLHLTGKDTSLALYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIVLVTALGLIVGFTNLSITDLFASLLAFIPTGWAILCLAVTWKKVVRSLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVETY 1906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29038063 29073133 + CmPI595203_06g018130.1 Cmu06g1813 419473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1813 1906 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 349 457 IPR026899 -
Cmu06g1813 1906 SMART FKS1_dom1_2 347 460 IPR026899 -
Cmu06g1813 1906 Pfam 1,3-beta-glucan synthase component 1030 1725 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
Cmu06g1813 1906 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 39 1900 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Cmu06g1813 1906 Coils Coil 155 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1989 Cmu-Chr3:27901461 Cmu06g1813 Cmu-Chr6:29038063 0.00E+00 dispersed
Cmu03g1995 Cmu-Chr3:28055352 Cmu06g1813 Cmu-Chr6:29038063 0.00E+00 dispersed
Cmu03g1999 Cmu-Chr3:28112748 Cmu06g1813 Cmu-Chr6:29038063 0.00E+00 dispersed
Cmu06g1813 Cmu-Chr6:29038063 Cmu09g2148 Cmu-Chr9:37554896 0.00E+00 dispersed
Cmu06g1813 Cmu-Chr6:29038063 Cmu09g0359 Cmu-Chr9:3425207 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1813 K11000 - csv:101217890 3707.92