Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu06g1825 | ATGATCTACTTCTCCGTGTCCTTCTTACTTCTCTCAAGTTCTTTATGGGCTTTCTTTCTTCTCTATCTTTGCATCTCTAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCACCTTCTTACCCCTTCTTCGGTTGCTTGATTTCCTTTTACAAAAACCGGCGCCGCCTTCTGGCATGGTACACCGACCTGCTGTCCGATTCGCCGACTCAGACCATTGTGGTGCACCGGCTCGGTTCGAGGCGGACCGTTGTGACGGCTAACCCAGCCAATGTGGAGCACATGCTCAAGACCAATTTCATTAATTACCCTAAAGGAAAGCCGTTTACTGACATACTCGGCGATCTACTCGGCTGTGGCATTTTTAACGTCGACGGCGATTTGTGGTCCAGCCAACGCAAGCTCGCCAGTCATGCATTTTCCGCTAAGTCTCTAAGAGAATTCGTCGTTAAGACGCTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCAGTAACGCTGCTCGAACTAACGCCGTCATTGATTTGCAAGATGTTTTGGGAAGACTCGCTTTTGACACAGTTTGTAAGGTGACGCTGGGAACGGATGAGCAATGCTTGGACATGTCGCGTCCAATTCCAGAAATAGTAAATGCATTCGACACGGCAACGGGGATCAGTGCAAAGCGAGCAATAGCGCCGCTATTTCTCACATGGAAGGCCAAGCGCATGCTCAACGTTGGCTCCGAAAAGAAGCTCAAAGAAGCGGTTCAAATGGTCCAGAAATGGGTCTCTAATATCATTCGCAATAAAAACAATAATACCCTCCATAACCATAACCAAACACACAACAATGATTTGTTATCCCGCCTCTTGTCGACCAACCACGACGAGGAAGTCGTTAGAGACATGATTATTAGCTTCATAATGGCCGGCCGTGACACCACCTCCGCCGCCATGACATGGCTCTTCTGGTTGCTCACAAAGCACCCAAAAGCCGAACAGGCCATAATCAACGAAGCTACTTCATTGTCCGACGATTCAAAAACCATGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCCATGCGGCTATACCCGCCAGTGGCTTGGGATTCGAAGCACGCGGCGGCAGCGGACATTCTCCCGGACGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCGTACGGAATGGGGAGGATGGAGGAGGTATGGGGGAAAGACCGGCTTGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAAACGGTCAGCCCGTTCAAGTTCCCGGTCTTTCAAGCGGGTCCGAGGATGTGCTTGGGAATGGAAATGGCGTTCATTCAGATGAAATACGTGGTGGCCACGGTTTTGAACCGGTTTGAATTTAGACCAGCGAGTGAAAATTCTCCGGTTTTTGTCCCGTTGTTGACAGCGCATATGGCGGGTGGACTACGGGTTTATGTTAGGGAAAGGATAGAACAAAAGTCAACTATGTGGTGA | 1536 | 48.7 | MIYFSVSFLLLSSSLWAFFLLYLCISKFYCFSRKRFYYSPPSYPFFGCLISFYKNRRRLLAWYTDLLSDSPTQTIVVHRLGSRRTVVTANPANVEHMLKTNFINYPKGKPFTDILGDLLGCGIFNVDGDLWSSQRKLASHAFSAKSLREFVVKTLEDEVHLRLIPLLSNAARTNAVIDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVNAFDTATGISAKRAIAPLFLTWKAKRMLNVGSEKKLKEAVQMVQKWVSNIIRNKNNNTLHNHNQTHNNDLLSRLLSTNHDEEVVRDMIISFIMAGRDTTSAAMTWLFWLLTKHPKAEQAIINEATSLSDDSKTMSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTPVRKGDRVTYFPYGMGRMEEVWGKDRLEFKPDRWFQNGELKTVSPFKFPVFQAGPRMCLGMEMAFIQMKYVVATVLNRFEFRPASENSPVFVPLLTAHMAGGLRVYVRERIEQKSTMW | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 29180453 | 29182511 | - | CmPI595203_06g018250.1 | Cmu06g1825 | 419485 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu06g1825 | 511 | PRINTS | P450 superfamily signature | 307 | 324 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | P450 superfamily signature | 364 | 375 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | SUPERFAMILY | Cytochrome P450 | 29 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | Pfam | Cytochrome P450 | 40 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | CDD | CYP86A | 73 | 496 | - | - | |
| Cmu06g1825 | 511 | PRINTS | E-class P450 group IV signature | 298 | 324 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | E-class P450 group IV signature | 451 | 469 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | E-class P450 group IV signature | 393 | 407 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | E-class P450 group IV signature | 410 | 428 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | PRINTS | E-class P450 group IV signature | 359 | 375 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | Gene3D | Cytochrome P450 | 20 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu06g1825 | 511 | FunFam | Cytochrome P450 | 31 | 506 | - | - | |
| Cmu06g1825 | 511 | PANTHER | CYTOCHROME P450 | 24 | 496 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu01g1193 | Cmu-Chr1:22953158 | Cmu06g1825 | Cmu-Chr6:29180453 | 5.70E-117 | dispersed | |
| Cmu06g1825 | Cmu-Chr6:29180453 | Cmu10g2385 | Cmu-Chr10:30269058 | 3.30E-112 | dispersed | |
| Cmu07g0133 | Cmu-Chr7:1218816 | Cmu06g1825 | Cmu-Chr6:29180453 | 8.20E-119 | transposed | |
| Cmu05g1416 | Cmu-Chr5:18365936 | Cmu06g1825 | Cmu-Chr6:29180453 | 2.50E-160 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu06g1825 | K20665 | - | csv:101202989 | 862.448 |