Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu06g1868 ATGGGTGTGTCAAAAGATGGGCAACGACAATCTCCGGTGCCAAGCTTTGTGTATTCTGGCAACAGGGGATGTTTCCAAACCCAAACACTGGTTAGGCGCTTCCCAATTGAAGCTCCGAAAGATAATATAAAGATGTATTCACCGGCCTTCTACGCGGCTTGCACAGCAGGCGGCATTTTGAGTTGTGGACTCACCCACATGGCTGTCACCCCCCTCGATCTCGTCAAGTGCAACATGCAGATCGACCCAGCAAAGTACAAGAATATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGAAAGGGTTCTTCCGGGGTTGGGTGCCAACGTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTACTATTCTGATATGGTTGGAACAGAGAATGCAGTCAAGTACAAAACTTTCATATACCTTGCTGGCTCAGCATCTGCAGAAGTGATTGCCGATGTCGCTCTCTGCCCCATGGAGGCCGTCAAAGTTCGTGTCCAGACTCAACCTGGCTTTGCTCGGGGTTTGTCAGATGGCCTTCCAAAGTTTGTCAAGTCTGAGGGTGCTCTCGGACTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCTTCTTTCGAAACAATTGTTGAGATGCTTTACAAGTATGCCATCCCAAGGCCAAAAGAACAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCCGGAGGGTATGTGGCCGGCGTCCTCTGTGCTGTGGTCTCACACCCAGCCGACAATCTTGTCTCTTTTCTCAACAATGCCAAGGGTGCAACTGCTGGGGATGCTGTCAAGCAGCTGGGAGTATGGGGTCTCTTCACTCGTGGCCTTCCGCTTCGGATTGTTATGATTGGAACTCTTACTGGGTCGCAATGGGGTATATACGACGCGTTCAAAGTTTTCGTTGGACTGCCAACAACTGGTGGCGCTACCCCTGCTCCTGCCGCTAGCAAGTGA 1032 50.0 MGVSKDGQRQSPVPSFVYSGNRGCFQTQTLVRRFPIEAPKDNIKMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDMVGTENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVKQLGVWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLPTTGGATPAPAASK 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29460902 29462344 - CmPI595203_06g018680.1 Cmu06g1868 419528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu06g1868 343 Gene3D Mitochondrial carrier domain 49 327 IPR023395 -
Cmu06g1868 343 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 36 335 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cmu06g1868 343 FunFam Phosphate carrier protein, mitochondrial 49 327 - -
Cmu06g1868 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 230 IPR018108 -
Cmu06g1868 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 133 IPR018108 -
Cmu06g1868 343 Pfam Mitochondrial carrier protein 147 234 IPR018108 -
Cmu06g1868 343 Pfam Mitochondrial carrier protein 51 136 IPR018108 -
Cmu06g1868 343 SUPERFAMILY Mitochondrial carrier 52 322 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1349 Cmu-Chr5:16581192 Cmu06g1868 Cmu-Chr6:29460902 2.20E-150 dispersed
Cmu06g1868 Cmu-Chr6:29460902 Cmu09g1153 Cmu-Chr9:12424375 3.80E-11 dispersed
Cmu06g1868 Cmu-Chr6:29460902 Cmu09g1150 Cmu-Chr9:12405340 2.90E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu06g1868 K15102 - csv:101220423 608.986