Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g0112 | ATGGCTTTCCAGAATATCGAAGTAACCCATTTCTATACGGTTCTTCTATGGTTTATGGTCTACGCAATAACGCACTGCTTTGCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGCGCTCCGGCGGTATTTCAATCCCCGAAATGCCCTCTTTGGAAGCTCTCCGACTACACATTTCAACCTCCCAACGCCCCTCCTTGTCAAATTGCAATGCATCAGGGTCGTAGGAAGTATCAGGAGGATCGCACTCTTTGTGCTCTCGACGTTCGAATTCCCTTCCCAAGTAAAACAGGTCTTAAGGAGGTTCCTGTGGGAATTATAGCAGTTTTTGATGGTCATAATGGTGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTCGTGCATACTTATTTTCTTCTTGATGCCACTTACTCTGGAATTTTCAAGAGATCCATTAAGACATCTTCAAATGAGAGGGAACATTGTACCCTCTTTAATCAACTTAGTTGGAGCGACAAAATTAGTAACCTTGACCTGGAACTTGGAAGGCTTAAATACTTACTTCCAGCAGATTTTGAAGATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGCTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAGGAGGCACATAAAAATAATCTTGTTTCCGGTTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTTGCGAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCTGCAGAGGCTAAAGCCACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGCGCTTCACGTGCAAGGGGCTATGGAAATTCTAGACCAGATTCATATGATGGGCTGATGCATTTTTATGTCAAAGAATTGACTAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCATGTTGTTGATTGGGGTGGTGTACCGAGAGTAAATGGTCAGTTGGCTATAACCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAGGTGACTGATTGGCAACCTTTGTCTCCCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCCCACAAGATGTTTGTGACTTGTTGTGGGAAATAAACAATGATGGTATATCAAGTTCCGAACATTCTCCTTCATGCTCATACTCACTGGCGGATTGCATTGTTAGCACTGCCTTTGAACGGGGAAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGACCTGCTAGTTCTTCTCGGAGATTTCAGGAGGGGAGCTTTGTTGCACAGAGAGACTCAAGTTTTCCCATATCTGGAATAGAAAATCTTATTAAAGAGCACTCAGGCAAGGGTGTCTCTTCCAGTGCTGTGCAGTTGGAGCATTCTCATCCAGTTATGTCCAAGTTCAACAGATTATTAGTTGAAGGAAAGCACAATAATCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTACATGTTGCGAACTCAAAATGAAGAAGAAGAATATTTATGTGATCTACCCCATGCTCTTCCAGAATCCCTTAATCAGCTATATGGTGGATCTGTCAATGTGTACACTGACCAAAGCTTGTGCTTTCATCTTGGAATGATTGGAGCCAATGGCCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGATTGCTTGAATCAATTCCTTTTCACGATCCTGGTCCAGATTATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATTTGTTGAAGAAAAGGTTTGCTCGTGGTTCCTATGGTGAAGTATGGCTGGCTTTTCACGGGAATTGCCAGGAAGCGTTTAGTGCAGTAGGAGAGAATGCTAACGTTTCGTGCAACTCATCTTTTGGAGACACCAATGCCAGAAATTATAGCTGCTCTTCAAATAGTTCTCAAGGCTATGCTCTGGATGATAACTTGTTCATCATGAAGCGTGTTATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTGAATGCTTCTACATGCCTTGGAGATGTGTTGTCGACGGGAACTTCAAACTTTGTCTTTGAAGAATCACCACGGGAACCTAAAGATTTATTGACAAATGATGAATCACTGGGTTACACCGTAGGGGAAACTAGGCATTTTAAAAATATTTCTCCGAATTGGTTTAGACCAAAGGGAGTTGTCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCTCGGTCTAATGAAATATGGCTTGTATTTCATTACGAAGGGACGTCCCTCTCGAAGCTCATATATTCTATTGAAAATGCTGATGAAGAAAAAGTTGAGCAAAAAAACCATGTTCAAATATTACGACCTTCTAAGTGGTGGCGTTGGTTGAAAACAACAGAAGCAGGACAAGAGGAGATGAAAAATTTGATACGTCAATTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCAAAGGGGAGATGAGAACTTCTCTACGAAAATGCGGATTATTGACTTTGGTAGTGCTATTGATGAATTCACACTTAAGCATCTTTATGGATCTATGGGACCTTCTAGAGCGGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCTAGTGCTACATTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGTTAGAATTGATCTTAGGATCACCCAATGTTTTTCAGGTAAGTGATTTAACCCGTGTTCTTTTGGACCAGCATCTTCAAGGCTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGATTTCCTCAAGAAGTTATCAAAAAAATGGTCATGGAGGTTCACCAGCATCCTGGAAATGCTCCGAAGAAGTTTTTGCCCACCAGATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTGCGATTGGTCCGCAATCTACTACAATGGAATCCGGAGGACCGTTTAAATATAAGTTATTCTTCCACCAAAGGTTTTGTTGCTGACAATCAGAAGCTCAGTTGA | 3273 | 40.94 | MAFQNIEVTHFYTVLLWFMVYAITHCFAESSTCLMVYKEGGAPAVFQSPKCPLWKLSDYTFQPPNAPPCQIAMHQGRRKYQEDRTLCALDVRIPFPSKTGLKEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRSIKTSSNEREHCTLFNQLSWSDKISNLDLELGRLKYLLPADFEDDFHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSRPDSYDGLMHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVSFKSYGVISAPEVTDWQPLSPNDSYLVASSDGIFEKLSPQDVCDLLWEINNDGISSSEHSPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPASSSRRFQEGSFVAQRDSSFPISGIENLIKEHSGKGVSSSAVQLEHSHPVMSKFNRLLVEGKHNNLGCFYLSENLDEYKDYMLRTQNEEEEYLCDLPHALPESLNQLYGGSVNVYTDQSLCFHLGMIGANGQCFNPEGFASFIGLLESIPFHDPGPDYQLFEHSPPVLRYLLKKRFARGSYGEVWLAFHGNCQEAFSAVGENANVSCNSSFGDTNARNYSCSSNSSQGYALDDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASTCLGDVLSTGTSNFVFEESPREPKDLLTNDESLGYTVGETRHFKNISPNWFRPKGVVYEEGLNHIVRYVESFESRSNEIWLVFHYEGTSLSKLIYSIENADEEKVEQKNHVQILRPSKWWRWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSQRGDENFSTKMRIIDFGSAIDEFTLKHLYGSMGPSRAEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGLKQLAYKLRSFMELCILIPGISSRSYQKNGHGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRNLLQWNPEDRLNISYSSTKGFVADNQKLS | 1090 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 936068 | 957143 | - | CmPI595203_07g001120.1 | Cmu07g0112 | 419663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g0112 | 1090 | SMART | serkin_6 | 612 | 1083 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu07g0112 | 1090 | SUPERFAMILY | Protein kinase-like (PK-like) | 771 | 1075 | IPR011009 | - | |
Cmu07g0112 | 1090 | ProSiteProfiles | PPM-type phosphatase domain profile. | 68 | 440 | IPR001932 | - | |
Cmu07g0112 | 1090 | ProSiteProfiles | Protein kinase domain profile. | 612 | 1083 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu07g0112 | 1090 | SMART | PP2C_4 | 62 | 438 | IPR001932 | - | |
Cmu07g0112 | 1090 | Gene3D | Transferase(Phosphotransferase) domain 1 | 816 | 1083 | - | - | |
Cmu07g0112 | 1090 | Pfam | Protein phosphatase 2C | 303 | 433 | IPR001932 | - | |
Cmu07g0112 | 1090 | Pfam | Protein phosphatase 2C | 201 | 256 | IPR001932 | - | |
Cmu07g0112 | 1090 | Pfam | Protein kinase domain | 772 | 1074 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu07g0112 | 1090 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 861 | 873 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu07g0112 | 1090 | Gene3D | - | 64 | 447 | IPR036457 | - | |
Cmu07g0112 | 1090 | SUPERFAMILY | PP2C-like | 68 | 441 | IPR036457 | - | |
Cmu07g0112 | 1090 | CDD | PP2Cc | 75 | 440 | IPR001932 | - | |
Cmu07g0112 | 1090 | PANTHER | PROTEIN PHOSPHATASE | 69 | 439 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g0112 | Cmu-Chr7:936068 | Cmu08g0943 | Cmu-Chr8:21761824 | 7.80E-18 | dispersed | |
Cmu07g0112 | Cmu-Chr7:936068 | Cmu03g0687 | Cmu-Chr3:1053201 | 8.30E-20 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75641 | PF00069 | Pkinase | 2.20E-23 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g0112 | - | - | - | 0.0 |