Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0112 ATGGCTTTCCAGAATATCGAAGTAACCCATTTCTATACGGTTCTTCTATGGTTTATGGTCTACGCAATAACGCACTGCTTTGCGGAATCGTCGACGTGCTTGATGGTGTACAAGGAAGGCGGCGCTCCGGCGGTATTTCAATCCCCGAAATGCCCTCTTTGGAAGCTCTCCGACTACACATTTCAACCTCCCAACGCCCCTCCTTGTCAAATTGCAATGCATCAGGGTCGTAGGAAGTATCAGGAGGATCGCACTCTTTGTGCTCTCGACGTTCGAATTCCCTTCCCAAGTAAAACAGGTCTTAAGGAGGTTCCTGTGGGAATTATAGCAGTTTTTGATGGTCATAATGGTGCTGAAGCTAGTGAGATGGCTTCAAAGATTTTGTTGGAGTATTTTGTCGTGCATACTTATTTTCTTCTTGATGCCACTTACTCTGGAATTTTCAAGAGATCCATTAAGACATCTTCAAATGAGAGGGAACATTGTACCCTCTTTAATCAACTTAGTTGGAGCGACAAAATTAGTAACCTTGACCTGGAACTTGGAAGGCTTAAATACTTACTTCCAGCAGATTTTGAAGATGATTTCCATTTGGAAATTTTGAAAGAAGCACTGCTGAGAGCTATACAAGATATTGATAAAACATTTTCCAAGGAGGCACATAAAAATAATCTTGTTTCCGGTTCTACTGCTACTGTTATATTATTAGCAGATGCACAAATTTTGGTTGCGAACATTGGTGACTCAAAGGCTTTCTTGTGCTCTGAAAAATTTCAGTCACCTGCAGAGGCTAAAGCCACCTTTTTAAGGTTATACAAGCAAAAAAGATATAGCGGCGCTTCACGTGCAAGGGGCTATGGAAATTCTAGACCAGATTCATATGATGGGCTGATGCATTTTTATGTCAAAGAATTGACTAGAGATCATCATCCAGATAGAGAGGATGAAAGATCTAGGGTGGAGATTGCTGGGGGTCATGTTGTTGATTGGGGTGGTGTACCGAGAGTAAATGGTCAGTTGGCTATAACCAGAGCAATTGGTGATGTGTCTTTTAAAAGCTATGGGGTTATATCTGCACCAGAGGTGACTGATTGGCAACCTTTGTCTCCCAACGATAGCTATTTGGTGGCTTCATCTGATGGCATTTTTGAGAAACTGAGCCCACAAGATGTTTGTGACTTGTTGTGGGAAATAAACAATGATGGTATATCAAGTTCCGAACATTCTCCTTCATGCTCATACTCACTGGCGGATTGCATTGTTAGCACTGCCTTTGAACGGGGAAGTATGGATAACATGGCTGCTATTGTGGTTCCTTTAAGACCTGCTAGTTCTTCTCGGAGATTTCAGGAGGGGAGCTTTGTTGCACAGAGAGACTCAAGTTTTCCCATATCTGGAATAGAAAATCTTATTAAAGAGCACTCAGGCAAGGGTGTCTCTTCCAGTGCTGTGCAGTTGGAGCATTCTCATCCAGTTATGTCCAAGTTCAACAGATTATTAGTTGAAGGAAAGCACAATAATCTGGGATGTTTTTATCTGTCTGAGAATCTGGATGAATACAAGGATTACATGTTGCGAACTCAAAATGAAGAAGAAGAATATTTATGTGATCTACCCCATGCTCTTCCAGAATCCCTTAATCAGCTATATGGTGGATCTGTCAATGTGTACACTGACCAAAGCTTGTGCTTTCATCTTGGAATGATTGGAGCCAATGGCCAGTGCTTTAATCCTGAAGGCTTTGCTAGTTTTATTGGATTGCTTGAATCAATTCCTTTTCACGATCCTGGTCCAGATTATCAACTATTTGAGCATTCACCACCTGTATTGAGGTATTTGTTGAAGAAAAGGTTTGCTCGTGGTTCCTATGGTGAAGTATGGCTGGCTTTTCACGGGAATTGCCAGGAAGCGTTTAGTGCAGTAGGAGAGAATGCTAACGTTTCGTGCAACTCATCTTTTGGAGACACCAATGCCAGAAATTATAGCTGCTCTTCAAATAGTTCTCAAGGCTATGCTCTGGATGATAACTTGTTCATCATGAAGCGTGTTATGGTTGAAAGAGGTGCTGGAGTCTATTTGAGTGGCTTACGGGAGAAATATTTTGGTGAAATATTTTTGAATGCTTCTACATGCCTTGGAGATGTGTTGTCGACGGGAACTTCAAACTTTGTCTTTGAAGAATCACCACGGGAACCTAAAGATTTATTGACAAATGATGAATCACTGGGTTACACCGTAGGGGAAACTAGGCATTTTAAAAATATTTCTCCGAATTGGTTTAGACCAAAGGGAGTTGTCTATGAAGAAGGTTTAAATCATATTGTGAGATATGTAGAATCTTTTGAATCTCGGTCTAATGAAATATGGCTTGTATTTCATTACGAAGGGACGTCCCTCTCGAAGCTCATATATTCTATTGAAAATGCTGATGAAGAAAAAGTTGAGCAAAAAAACCATGTTCAAATATTACGACCTTCTAAGTGGTGGCGTTGGTTGAAAACAACAGAAGCAGGACAAGAGGAGATGAAAAATTTGATACGTCAATTGTTGATGGCACTCAAGTCTTGTCATGACCGCAATATCACTCACAGGGATATTAAACCTGAGAACATGGTGATATGCTTTGAAGATCAGGCTACTGGAAAATGCTTGAATGGAAGTCAAAGGGGAGATGAGAACTTCTCTACGAAAATGCGGATTATTGACTTTGGTAGTGCTATTGATGAATTCACACTTAAGCATCTTTATGGATCTATGGGACCTTCTAGAGCGGAACAGACTTATGATTACACACCTCCTGAAGCCTTGCTTAATTCAAGTTGGTATCAGGAGATGTCTAGTGCTACATTGAAGTATGATATGTGGAGCGTTGGTGTAGTGATGTTAGAATTGATCTTAGGATCACCCAATGTTTTTCAGGTAAGTGATTTAACCCGTGTTCTTTTGGACCAGCATCTTCAAGGCTGGAATGAAGGCTTAAAGCAGCTAGCATACAAGCTTAGGTCGTTCATGGAGTTGTGCATTTTAATTCCTGGGATTTCCTCAAGAAGTTATCAAAAAAATGGTCATGGAGGTTCACCAGCATCCTGGAAATGCTCCGAAGAAGTTTTTGCCCACCAGATAAAGAGTAGAGATCCTCTTAAACTAGGGTTTCCAAATGTTTGGGCTCTGCGATTGGTCCGCAATCTACTACAATGGAATCCGGAGGACCGTTTAAATATAAGTTATTCTTCCACCAAAGGTTTTGTTGCTGACAATCAGAAGCTCAGTTGA 3273 40.94 MAFQNIEVTHFYTVLLWFMVYAITHCFAESSTCLMVYKEGGAPAVFQSPKCPLWKLSDYTFQPPNAPPCQIAMHQGRRKYQEDRTLCALDVRIPFPSKTGLKEVPVGIIAVFDGHNGAEASEMASKILLEYFVVHTYFLLDATYSGIFKRSIKTSSNEREHCTLFNQLSWSDKISNLDLELGRLKYLLPADFEDDFHLEILKEALLRAIQDIDKTFSKEAHKNNLVSGSTATVILLADAQILVANIGDSKAFLCSEKFQSPAEAKATFLRLYKQKRYSGASRARGYGNSRPDSYDGLMHFYVKELTRDHHPDREDERSRVEIAGGHVVDWGGVPRVNGQLAITRAIGDVSFKSYGVISAPEVTDWQPLSPNDSYLVASSDGIFEKLSPQDVCDLLWEINNDGISSSEHSPSCSYSLADCIVSTAFERGSMDNMAAIVVPLRPASSSRRFQEGSFVAQRDSSFPISGIENLIKEHSGKGVSSSAVQLEHSHPVMSKFNRLLVEGKHNNLGCFYLSENLDEYKDYMLRTQNEEEEYLCDLPHALPESLNQLYGGSVNVYTDQSLCFHLGMIGANGQCFNPEGFASFIGLLESIPFHDPGPDYQLFEHSPPVLRYLLKKRFARGSYGEVWLAFHGNCQEAFSAVGENANVSCNSSFGDTNARNYSCSSNSSQGYALDDNLFIMKRVMVERGAGVYLSGLREKYFGEIFLNASTCLGDVLSTGTSNFVFEESPREPKDLLTNDESLGYTVGETRHFKNISPNWFRPKGVVYEEGLNHIVRYVESFESRSNEIWLVFHYEGTSLSKLIYSIENADEEKVEQKNHVQILRPSKWWRWLKTTEAGQEEMKNLIRQLLMALKSCHDRNITHRDIKPENMVICFEDQATGKCLNGSQRGDENFSTKMRIIDFGSAIDEFTLKHLYGSMGPSRAEQTYDYTPPEALLNSSWYQEMSSATLKYDMWSVGVVMLELILGSPNVFQVSDLTRVLLDQHLQGWNEGLKQLAYKLRSFMELCILIPGISSRSYQKNGHGGSPASWKCSEEVFAHQIKSRDPLKLGFPNVWALRLVRNLLQWNPEDRLNISYSSTKGFVADNQKLS 1090
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 936068 957143 - CmPI595203_07g001120.1 Cmu07g0112 419663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0112 1090 SMART serkin_6 612 1083 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0112 1090 SUPERFAMILY Protein kinase-like (PK-like) 771 1075 IPR011009 -
Cmu07g0112 1090 ProSiteProfiles PPM-type phosphatase domain profile. 68 440 IPR001932 -
Cmu07g0112 1090 ProSiteProfiles Protein kinase domain profile. 612 1083 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0112 1090 SMART PP2C_4 62 438 IPR001932 -
Cmu07g0112 1090 Gene3D Transferase(Phosphotransferase) domain 1 816 1083 - -
Cmu07g0112 1090 Pfam Protein phosphatase 2C 303 433 IPR001932 -
Cmu07g0112 1090 Pfam Protein phosphatase 2C 201 256 IPR001932 -
Cmu07g0112 1090 Pfam Protein kinase domain 772 1074 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0112 1090 ProSitePatterns Serine/Threonine protein kinases active-site signature. 861 873 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0112 1090 Gene3D - 64 447 IPR036457 -
Cmu07g0112 1090 SUPERFAMILY PP2C-like 68 441 IPR036457 -
Cmu07g0112 1090 CDD PP2Cc 75 440 IPR001932 -
Cmu07g0112 1090 PANTHER PROTEIN PHOSPHATASE 69 439 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0112 Cmu-Chr7:936068 Cmu08g0943 Cmu-Chr8:21761824 7.80E-18 dispersed
Cmu07g0112 Cmu-Chr7:936068 Cmu03g0687 Cmu-Chr3:1053201 8.30E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75641 PF00069 Pkinase 2.20E-23 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0112 - - - 0.0