Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0147 ATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGCGGTGGCAGTGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCGCTCCAACAACAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCAGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAAAATCACCTTCATGAAAGCCAAAGCAGATCACCAGAAGAATCTCAATTTCTTCAACCATTTCCTAGAAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA 708 40.82 MASSSSSSSANTSVSGSGGGGGSGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSLESAANNDEALLFINNQNHLHESQSRSPEESQFLQPFPRKKLPSSHADLGELQALALRMMRN 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1393721 1395123 + CmPI595203_07g001470.1 Cmu07g0147 419698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0147 235 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 198 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cmu07g0147 235 MobiDBLite consensus disorder prediction 193 219 - -
Cmu07g0147 235 MobiDBLite consensus disorder prediction 1 20 - -
Cmu07g0147 235 Pfam Lateral organ boundaries (LOB) domain 26 124 IPR004883 -
Cmu07g0147 235 ProSiteProfiles LOB domain profile. 25 127 IPR004883 -
Cmu07g0147 235 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0241 Cmu-Chr5:2045489 Cmu07g0147 Cmu-Chr7:1393721 1.70E-39 dispersed
Cmu06g0034 Cmu-Chr6:357722 Cmu07g0147 Cmu-Chr7:1393721 7.60E-43 dispersed
Cmu07g0147 Cmu-Chr7:1393721 Cmu09g0771 Cmu-Chr9:7339267 1.50E-38 dispersed
Cmu07g0147 Cmu-Chr7:1393721 Cmu07g0148 Cmu-Chr7:1399554 2.70E-40 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6472 PF03195 LOB 2.70E-36 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0147 K13944 - csv:101214521 367.851