Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0148 ATGACGGGCTCAGGTTCTCCTTGTGGAGCTTGTAAATTCTTGAGAAGAAAATGTGTTAGAGGATGTGTTTTTGCACCATATTTTTGCCATGAACAAGGAGCTACTCATTTTGCTGCCATTCATAAAGTGTTTGGAGCTAGTAATGTTTCTAAGCTTCTTGCTCGTCTTCCTATTAGTGAAAGATGTGAGGCTGCTGTTACTATTTCTTATGAGGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTTGCTTCTTTGAAGGAACAAGCAGCGGAAAGCATTATGAATGCATCTGGTAACGGGAGCGGAGTGAATGAAAAGATTAATAATAGAAAGGTTCCTTCTCATCCCCAAGATCTCCATAGTTGGTTTCAATCGGAGCAACCAAACGTAACACTCGAGTTCAATCCGAATCCAACTCCGAATAATAATTCAGCATCAAACCCTTATTATGATGAGAATTATTGCATTATGGTTAATTCACAATCCAATGGGAACTATGAACATCACATGACTAAAATGGAGGAAAGTGGATCATATGGGAGCTATGAAGAAACCTCAGGCTATTCCATGTACACTCTTGATCAATTGCATTCAAATGTTCAACAATGGAGCTTCAATAAGTCTGCTGATGATTTACAATCTGTTGCTTTTGGCAATAGACATTGCGCCGCCGCCGCCTCCCAGTGTCAGCCGCCGCCAGTTTGTCTTCCTCCGCTGCCGCTTCAGTCAAACGCTCGCCTGACTGCTCGTCACCGAACCGGTAACGTTTGGGTGACCGGAAGTTGCGTTGGGTAG 852 43.31 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGSGVNEKINNRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNSASNPYYDENYCIMVNSQSNGNYEHHMTKMEESGSYGSYEETSGYSMYTLDQLHSNVQQWSFNKSADDLQSVAFGNRHCAAAASQCQPPPVCLPPLPLQSNARLTARHRTGNVWVTGSCVG 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1399554 1406963 - CmPI595203_07g001480.1 Cmu07g0148 419699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0148 283 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Cmu07g0148 283 Coils Coil 87 114 - -
Cmu07g0148 283 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 235 - GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER)
Cmu07g0148 283 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0035 Cmu-Chr6:375472 Cmu07g0148 Cmu-Chr7:1399554 1.00E-33 dispersed
Cmu07g0148 Cmu-Chr7:1399554 Cmu09g0771 Cmu-Chr9:7339267 4.80E-44 dispersed
Cmu11g1286 Cmu-Chr11:25051450 Cmu07g0148 Cmu-Chr7:1399554 1.60E-07 dispersed
Cmu07g0147 Cmu-Chr7:1393721 Cmu07g0148 Cmu-Chr7:1399554 2.70E-40 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6473 PF03195 LOB 1.50E-35 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0148 K13945 - csv:101214764 415.616