Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0155 ATGGAATCCTCTTATTTTTCGTTTTCCGATTCGGATTTCTCGACGGAATCTTCATTCGGATCAGCGGAATCATCGTTCTCATGGAGTGAGTTTTTCTCGATTCACAGTACCCTAGAAAACTCAATCTCACTACACGGAGAATTTCTCGGGAATCAAACATCGGAATCGGAATCGAAAATTGTAGTGAAGGAAGAAACCGAAGTGAGTTCGATTGATTTCGAGGAGGAGAAAGAAAGGAAGACAACGGAGAAGAGTTACAGAGGAGTGAGACGGCGGCCGTGGGGGAAATACGCGGCGGAGATTAGGGATTCGACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGATAGCGCTGAAGCTGCGGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAGCAATGGCGGTGCTGAATTTTCCGGTGGAAATGGTGAGGGAATCACTGAAGGATATTAAGTATCAACTGGAAGAAGGATGTTCGCCGGTGGTGGCTTTGAAGAGGAAACACTCAATGAGAAGGAAATCGGCGGCGGCGGCGGTGAAAAGCCAAGGGGCGGCGGAGAAGAAGAAGATGAAGAAAAACAACAATGTGGTGATTTTAGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGCTAAGTTCATGA 660 46.06 MESSYFSFSDSDFSTESSFGSAESSFSWSEFFSIHSTLENSISLHGEFLGNQTSESESKIVVKEETEVSSIDFEEEKERKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGAMAVLNFPVEMVRESLKDIKYQLEEGCSPVVALKRKHSMRRKSAAAAVKSQGAAEKKKMKKNNNVVILEDLGTEYLEELLMLSS 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1473892 1474551 + CmPI595203_07g001550.1 Cmu07g0155 419706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0155 219 MobiDBLite consensus disorder prediction 1 21 - -
Cmu07g0155 219 Pfam AP2 domain 85 135 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0155 219 SMART rav1_2 85 149 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0155 219 PRINTS Ethylene responsive element binding protein signature 86 97 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0155 219 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0155 219 Gene3D AP2/ERF domain 84 145 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0155 219 FunFam Ethylene-responsive transcription factor 2 84 145 - -
Cmu07g0155 219 SUPERFAMILY DNA-binding domain 85 145 IPR016177 GO:0003677(InterPro)
Cmu07g0155 219 CDD AP2 86 144 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0155 219 PANTHER DNA-BINDING DOMAIN 49 193 IPR044808 GO:0003700(InterPro)|GO:0009873(InterPro)
Cmu07g0155 219 ProSiteProfiles AP2/ERF domain profile. 85 143 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0682 Cmu-Chr6:7808550 Cmu07g0155 Cmu-Chr7:1473892 1.40E-41 dispersed
Cmu07g0155 Cmu-Chr7:1473892 Cmu09g0739 Cmu-Chr9:7028368 3.50E-42 dispersed
Cmu05g0464 Cmu-Chr5:3881839 Cmu07g0155 Cmu-Chr7:1473892 1.20E-42 wgd
Cmu06g0680 Cmu-Chr6:7769344 Cmu07g0155 Cmu-Chr7:1473892 2.50E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6474 PF00847 AP2 1.20E-14 CL0081 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0155 K14516 - csv:101220325 295.819