Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0206 ATGCCTTTCTCGACTTTGCACCTTCTTTTGGTTCTTCATGCGTTCGATTTGCTTTTCTCTTGCTCAGGACAATCTTCAGTTTCACCACACATATACTTATCTCCTTCCTTACAGCCAAACCTGCAAACAATGACCTCGGAAATGTCAACAGAGCATGCAAGGTTGGAGTCGATAAGTTTTTCATTTGTGCCTTCAAAGTTACGTGGTAACTGGATATTTAAGTCTTCTTTGGGACCATCTACTGCTCCTGCACCCTCTCCAGGTCCTAGGAGTGCACCCTTACCCATCCGACATCATCGACGGCGTCGTGGACGACCTCATGTGGTTGCTCCTACCCCATCAAAAGACCAAGGTTGTGATCAAATATGCATGGAGCCCCTTACTGCAGCTCCCTTTGGTTCACCTTGTGGCTGTGTGTTTCCCATGAAAGTCAGACTTCTTCTGGATATAGCTCCATATGCTGTTTTCCCTGTGATGAACGAGCTTGAAAGTGAGATTGCAGTGGGGACTTATTTGGAGCAGAGCCAAGTGAAAATCATGGGTGCAACTGCAGACAGTCAAAATCAAGGAAGAACTATGGTGGACATAAATTTAGTACCTCTAGGAGAGAAGTTTGATAATACAACTGCAGTTCTGACATACAGAAGGTTTTGGGATAAAAAAGTGCATTTAAATATGACGCTTTTTGGTGATTATGAAGTTGTCTACATCAGCTATCCAGGGATTCCTTCTTCCCCGCCATATGGAGGGTACATGGGAAGTGCTCCTAGTGGAAGTGCGGGTGATCTTCCCATTACTGCAAATTTCGTTAATAAGAGCCAGAAGATGAATGTCAAAACAATTGCCATCATAGCACTTTCAGCATTTGTTGTGTTATTAGTGTTCATTGGAGCTCTCTCCATCTTTTTTAAATGGAGAAAAGTTGGCAGACCATCTAGTGCTGTTGGCCCTGTCTTCACGTCATCAATTAACAAAAGATCTGGTCTAGGATCAGCGTTATCAAGTAGCATTGCAAGCTCCACCTCTGTTTCCCTAATTTCCACAATGCCAACCAGTCTTCAATCTGTTAAAACATTTGCACTTTCTGAACTTGAGAAAGCAACAGACAAGTTTAGTTCAAAAAGGATTTTAGGTGAAGGGGGATTTGGCCGAGTTTACTGTGGTATTTTGGAAGATGGAAATGAAGTTGCAGTTAAGTTGCTTACTCGGGACAATCAGAATAGAGACCGTGAATTTATTGCCGAAGTTGAGATGTTGAGTAGACTGCATCATCGGAATCTTGTGAAACTGATTGGGATATGCATTGAAGGACGAACGCGCTGCTTAGTTTATGAGCTTGTCCATAATGGCAGTGTTGAGTCTCACTTGCATGGCATTGACAAGAGAAAAGGACCTCTTGACTGGGACGCACGATTAAAGATTGCTCTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAAGATTCTAATCCCCGCGTTATTCACCGTGATTTCAAGGCAAGTAATGTTCTGTTGGAAGTTGACTTCACCCCCAAGGTTTCGGATTTTGGATTGGCTAGGGAAGCAACGGAAGGAAGTGAACATATCTCAACACGGGTGATGGGGACTTTCGGGTATGTAGCCCCTGAATATGCAATGACTGGGCACCTGCTCGTCAAAAGTGATGTTTACAGTTATGGAGTTGTGCTACTTGAGCTTCTTTCGGGAAGAAAACCGGTGGACATGTCCCAACCACATGGTGAGGAGAATCTCGTAACGTGGGCGCGACCTCTATTGACCAGTAGAGAAGGTTTGGAGCAACTAGTGGATCCTTCTCTAGCTGGTACTTACGACTTCGATGACATGGCCAAGGTGGCTGCCATAGCTTCAATGTGCGTTCACCCAGAGGTGACCCAGAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTAAAACTAATATACAACGACACAGACGAGACATGTGCAGATTACTGCAGTCAAAAGGAGTCCTCTGCTCGGGACTCAGATTTCAAAGGCGACCTTGTCCCATCCGACAGCAGTTGGTGGAATGCCGGTGGCCTTACACCCCGACTGACATATGGTCAAGCCTCTTCCTTCATCACCATGGAATACAGCTCTGGCCCTCTTGAAGAGATGGAAAACCGCCCGTTTTCAACTTCAAGTTTGGTAGGCGACGAGATATCTTTGCCTATTCGGCATGGAAACAGGTCAGGTCCGTTACGAACCGCTCGAAGCAAGCCTGCGTTCTATAGATTTTCAGGAAGTAGGAGCGAGCATGGAGGATTTCTTACAAGGCCTCCTTGGAACAGCAGTGGGTTTTGGTCATTACGATTCTTCCTTCTTCTTTCCAAATCAACCAGGCTGAGAATGTCGTCGTCAACCTCCTCCTCCGTTTCGATTTCACTTCCTGAAAATCGTGTGGTTCTTGGTGTTGGTATTACGTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCACAAGCTTTAAGGTACAAGGTGGAGGAAATGTAGGTAATGCTTTAACTTCTGCGGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCAGATGATACTCAAGGAAGGAGCATAATGGAGGAGCTAGAAGCTGATGGCATAGATACATCATTTCTTGTAGTTTCTGAAGGGGGTATTTCATCATTTTCCTATATTATTGTGGATAATAAAACGCACACTCGTACATGCATCCTCACCCCAGGATCTCCTCCGATGGTGCCAGATGACCTTTCACGATCAAGCTTGCTGTCTGCTTTAAACGGGGCTAGAATTGTATATTCTGACGTAGGATTGCATGAAATTGCTTTGCTTGTTGCACGAGAGGCAGCTCGGCAGAATATACCTATGTTGATCGATGCCGAAAGGAAAAAGGAAGGTGTGGATGATCTCCTGGCATTTGCTAGTTATGTAGTCTGCTCAACAAAATTTCCACAGGCAAAAACGTTATTTAATGGACAGGAATGGACTGAGGCACCATCGATTCCATCTGCACTTCTTTCCATGCTTCTGCGATATCCAAAACTCAGATTTGTGATTGTCACCTTGGGTGAAAATGGATGCATAATGCTCGAAAGAAATATTGATGAAACACCTGATCAAATGGAAGAGTTTGAAGTAGACAACTTACTTGAAGTGGTCAAGAGCAGAAGGGATGAGAATATAAATGTTCCAACTTTTGTTTCATCGCCAGTGGCCAAGTTGAGAGCTGAGGGGATAGGGACAGTTTGTGGCAGGCTGTTGCTCGGGACAGCTGAAAAAATACCGGAGTCCGAGATTGTTGATACGACCGGTGCTGGAGATGCATTCGTTGGAGCAGTTCTTTATGCCTTATGTGCCAACATGCCACCAGAGAACTTATTGCCATTTTCTGCTCAAGTGGTTTTACGGCCACAAACTTGGGGAAAACAAGTTCTAATGCCAGATTTGATGCTTTCTTCTGATGAACCAGCTATTATGAAAATTCTTCTTATATTCTGTTATCCTTTTGTCTTGAATAGAAACTGTTTTCAGATGGCTGATATTGGGGCTTGA 3579 44.48 MPFSTLHLLLVLHAFDLLFSCSGQSSVSPHIYLSPSLQPNLQTMTSEMSTEHARLESISFSFVPSKLRGNWIFKSSLGPSTAPAPSPGPRSAPLPIRHHRRRRGRPHVVAPTPSKDQGCDQICMEPLTAAPFGSPCGCVFPMKVRLLLDIAPYAVFPVMNELESEIAVGTYLEQSQVKIMGATADSQNQGRTMVDINLVPLGEKFDNTTAVLTYRRFWDKKVHLNMTLFGDYEVVYISYPGIPSSPPYGGYMGSAPSGSAGDLPITANFVNKSQKMNVKTIAIIALSAFVVLLVFIGALSIFFKWRKVGRPSSAVGPVFTSSINKRSGLGSALSSSIASSTSVSLISTMPTSLQSVKTFALSELEKATDKFSSKRILGEGGFGRVYCGILEDGNEVAVKLLTRDNQNRDREFIAEVEMLSRLHHRNLVKLIGICIEGRTRCLVYELVHNGSVESHLHGIDKRKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEVDFTPKVSDFGLAREATEGSEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPHGEENLVTWARPLLTSREGLEQLVDPSLAGTYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCADYCSQKESSARDSDFKGDLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLVGDEISLPIRHGNRSGPLRTARSKPAFYRFSGSRSEHGGFLTRPPWNSSGFWSLRFFLLLSKSTRLRMSSSTSSSVSISLPENRVVLGVGITSVDFLAAVASYPNPDDKIRTTSFKVQGGGNVGNALTSAARLGLTPRIISKVADDTQGRSIMEELEADGIDTSFLVVSEGGISSFSYIIVDNKTHTRTCILTPGSPPMVPDDLSRSSLLSALNGARIVYSDVGLHEIALLVAREAARQNIPMLIDAERKKEGVDDLLAFASYVVCSTKFPQAKTLFNGQEWTEAPSIPSALLSMLLRYPKLRFVIVTLGENGCIMLERNIDETPDQMEEFEVDNLLEVVKSRRDENINVPTFVSSPVAKLRAEGIGTVCGRLLLGTAEKIPESEIVDTTGAGDAFVGAVLYALCANMPPENLLPFSAQVVLRPQTWGKQVLMPDLMLSSDEPAIMKILLIFCYPFVLNRNCFQMADIGA 1192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1962706 1977680 + CmPI595203_07g002060.1 Cmu07g0206 419757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0206 1192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0206 1192 CDD ribokinase_group_B 807 1142 - -
Cmu07g0206 1192 CDD STKc_IRAK 377 646 - -
Cmu07g0206 1192 PANTHER OS01G0750732 PROTEIN 121 668 IPR050885 -
Cmu07g0206 1192 FunFam receptor-like serine/threonine-protein kinase ALE2 344 446 - -
Cmu07g0206 1192 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 1110 1123 IPR002173 GO:0016301(InterPro)
Cmu07g0206 1192 SUPERFAMILY Ribokinase-like 808 1140 IPR029056 -
Cmu07g0206 1192 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524(InterPro)
Cmu07g0206 1192 Pfam Protein tyrosine and serine/threonine kinase 374 642 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0206 1192 MobiDBLite consensus disorder prediction 79 115 - -
Cmu07g0206 1192 MobiDBLite consensus disorder prediction 94 108 - -
Cmu07g0206 1192 Pfam pfkB family carbohydrate kinase 1101 1139 IPR011611 -
Cmu07g0206 1192 Pfam pfkB family carbohydrate kinase 811 1040 IPR011611 -
Cmu07g0206 1192 Gene3D Transferase(Phosphotransferase) domain 1 447 669 - -
Cmu07g0206 1192 Gene3D - 807 1143 IPR029056 -
Cmu07g0206 1192 FunFam Receptor-like serine/threonine-protein kinase ALE2 447 663 - -
Cmu07g0206 1192 SUPERFAMILY Protein kinase-like (PK-like) 355 650 IPR011009 -
Cmu07g0206 1192 Gene3D Phosphorylase Kinase; domain 1 343 446 - -
Cmu07g0206 1192 PRINTS Ribokinase signature 837 856 IPR002139 GO:0016301(InterPro)
Cmu07g0206 1192 PRINTS Ribokinase signature 810 831 IPR002139 GO:0016301(InterPro)
Cmu07g0206 1192 PRINTS Ribokinase signature 1027 1038 IPR002139 GO:0016301(InterPro)
Cmu07g0206 1192 ProSiteProfiles Protein kinase domain profile. 371 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2151 Cmu-Chr3:29986813 Cmu07g0206 Cmu-Chr7:1962706 1.30E-177 dispersed
Cmu03g2269 Cmu-Chr3:31385004 Cmu07g0206 Cmu-Chr7:1962706 7.10E-84 dispersed
Cmu07g0206 Cmu-Chr7:1962706 Cmu09g0061 Cmu-Chr9:847653 3.70E-170 dispersed
Cmu07g0805 Cmu-Chr7:20537696 Cmu07g0206 Cmu-Chr7:1962706 7.70E-37 dispersed
Cmu07g1311 Cmu-Chr7:28396657 Cmu07g0206 Cmu-Chr7:1962706 1.70E-55 dispersed
Cmu08g0556 Cmu-Chr8:17620024 Cmu07g0206 Cmu-Chr7:1962706 3.10E-66 dispersed
Cmu09g0307 Cmu-Chr9:2924701 Cmu07g0206 Cmu-Chr7:1962706 3.80E-70 dispersed
Cmu10g2083 Cmu-Chr10:26788910 Cmu07g0206 Cmu-Chr7:1962706 4.30E-74 dispersed
Cmu07g0206 Cmu-Chr7:1962706 Cmu07g0207 Cmu-Chr7:1992666 2.20E-175 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75644 PF07714 PK_Tyr_Ser-Thr 4.80E-46 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0206 - - - 0.0