Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0244 ATGGGCGGCCGCACGTTGTTCACTTTGGCTGAGGTTGCCTCCCATGACAATCGCAACGACTGCTGGTTGATCATCGAAGACAAGGTGTATGATGTAACAAAATTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGGCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTTGGGCACAGTAGTGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACTATTCCTGTGAAAAGGAAGTACACTCCTCCAAAGCAGCCACTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGGTAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATACCAAAACAACTTAA 402 46.02 MGGRTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLAGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPVKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILGLAFGIHLYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2439450 2441463 - CmPI595203_07g002440.1 Cmu07g0244 419795

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0244 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cmu07g0244 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cmu07g0244 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cmu07g0244 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cmu07g0244 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cmu07g0244 133 PANTHER CYTOCHROME B5 6 126 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cmu07g0244 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 91 IPR036400 -
Cmu07g0244 133 FunFam Cytochrome b5 type B 2 84 - -
Cmu07g0244 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Cmu07g0244 133 SMART Cyt_b5_2 7 80 IPR001199 -
Cmu07g0244 133 Gene3D - 3 85 IPR036400 -
Cmu07g0244 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0244 K23490 - - csv:101212882 260.766
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0244 Cmu-Chr7:2439450 Cmu08g0990 Cmu-Chr8:22137338 3.70E-23 dispersed
Cmu11g0205 Cmu-Chr11:2508603 Cmu07g0244 Cmu-Chr7:2439450 9.60E-16 transposed
Cmu05g0363 Cmu-Chr5:3084850 Cmu07g0244 Cmu-Chr7:2439450 4.70E-50 wgd
Cmu06g0773 Cmu-Chr6:9444374 Cmu07g0244 Cmu-Chr7:2439450 3.00E-49 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmu05g0363 . 1 133 NADPH P450 reductases AT5G53560 68.4 1.5e-51 199.1
Cmu01g0022 . 23 138 NADPH P450 reductases AT5G53560 78.4 5.6e-51 197.2
Cmu06g0773 . 1 133 NADPH P450 reductases AT5G53560 64.7 9.9e-48 186.4
Cmu07g0244 . 4 131 NADPH P450 reductases AT5G53560 62.5 1.0e-44 176.4
Cmu05g0363 . 1 132 NADPH P450 reductases AT5G48810 64.9 7.9e-48 186.8
Cmu06g0773 . 1 133 NADPH P450 reductases AT5G48810 60.7 3.3e-46 181.4
Cmu07g0244 . 2 132 NADPH P450 reductases AT5G48810 62.4 2.2e-45 178.7
Cmu01g0022 . 23 138 NADPH P450 reductases AT5G48810 61.9 2.1e-40 162.2
Cmu05g0363 . 22 133 NADPH P450 reductases AT2G32720 84.8 7.3e-51 196.8
Cmu06g0773 . 22 133 NADPH P450 reductases AT2G32720 78.6 1.4e-46 182.6
Cmu07g0244 . 21 132 NADPH P450 reductases AT2G32720 71.4 8.1e-42 166.8
Cmu01g0022 . 18 137 NADPH P450 reductases AT2G32720 65.0 9.0e-41 163.3
Cmu04g0549 . 2 281 NADPH P450 reductases AT5G17770 81.4 1.5e-130 462.6
Cmu10g2408 . 2 280 NADPH P450 reductases AT5G17770 78.1 7.7e-127 450.3
Cmu02g2404 . 10 282 NADPH P450 reductases AT5G17770 73.3 3.6e-116 414.8
Cmu05g0363 . 1 133 NADPH P450 reductases AT5G53560 68.4 1.5e-51 199.1
Cmu01g0022 . 23 138 NADPH P450 reductases AT5G53560 78.4 5.6e-51 197.2
Cmu06g0773 . 1 133 NADPH P450 reductases AT5G53560 64.7 9.9e-48 186.4
Cmu07g0244 . 4 131 NADPH P450 reductases AT5G53560 62.5 1.0e-44 176.4
Cmu05g0363 . 1 132 NADPH P450 reductases AT5G48810 64.9 7.9e-48 186.8
Cmu06g0773 . 1 133 NADPH P450 reductases AT5G48810 60.7 3.3e-46 181.4
Cmu07g0244 . 2 132 NADPH P450 reductases AT5G48810 62.4 2.2e-45 178.7
Cmu01g0022 . 23 138 NADPH P450 reductases AT5G48810 61.9 2.1e-40 162.2
Cmu05g0363 . 22 133 NADPH P450 reductases AT2G32720 84.8 7.3e-51 196.8
Cmu06g0773 . 22 133 NADPH P450 reductases AT2G32720 78.6 1.4e-46 182.6
Cmu07g0244 . 21 132 NADPH P450 reductases AT2G32720 71.4 8.1e-42 166.8
Cmu01g0022 . 18 137 NADPH P450 reductases AT2G32720 65.0 9.0e-41 163.3
Cmu04g0549 . 2 281 NADPH P450 reductases AT5G17770 81.4 1.5e-130 462.6
Cmu10g2408 . 2 280 NADPH P450 reductases AT5G17770 78.1 7.7e-127 450.3
Cmu02g2404 . 10 282 NADPH P450 reductases AT5G17770 73.3 3.6e-116 414.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156