Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0244 ATGGGCGGCCGCACGTTGTTCACTTTGGCTGAGGTTGCCTCCCATGACAATCGCAACGACTGCTGGTTGATCATCGAAGACAAGGTGTATGATGTAACAAAATTCCTTGAAGACCATCCTGGTGGTGATGAAGTCTTGTTGGCAGGCGTTGGTAAGGATGCAACCAATGATTTTTTCGACGTTGGGCACAGTAGTGCTGCTAGAGCAATGATGGAAGAATTTTACGTAGGCGATATCGATAGCTCGACTATTCCTGTGAAAAGGAAGTACACTCCTCCAAAGCAGCCACTATACAACCAAGACAAGACACCAGAATTCATTATCAAGGTCCTCCAGTTTCTTGCTCCCCTGGTAATTTTGGGCTTGGCTTTTGGCATCCACCTCTATACCAAAACAACTTAA 402 46.02 MGGRTLFTLAEVASHDNRNDCWLIIEDKVYDVTKFLEDHPGGDEVLLAGVGKDATNDFFDVGHSSAARAMMEEFYVGDIDSSTIPVKRKYTPPKQPLYNQDKTPEFIIKVLQFLAPLVILGLAFGIHLYTKTT 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2439450 2441463 - CmPI595203_07g002440.1 Cmu07g0244 419795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0244 133 PRINTS Cytochrome B5 signature 54 61 IPR001199 -
Cmu07g0244 133 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Cmu07g0244 133 PRINTS Cytochrome B5 signature 29 39 IPR001199 -
Cmu07g0244 133 PRINTS Cytochrome B5 signature 39 53 IPR001199 -
Cmu07g0244 133 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 4 80 IPR001199 -
Cmu07g0244 133 PANTHER CYTOCHROME B5 6 126 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cmu07g0244 133 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 91 IPR036400 -
Cmu07g0244 133 FunFam Cytochrome b5 type B 2 84 - -
Cmu07g0244 133 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 35 42 IPR018506 GO:0020037(InterPro)
Cmu07g0244 133 SMART Cyt_b5_2 7 80 IPR001199 -
Cmu07g0244 133 Gene3D - 3 85 IPR036400 -
Cmu07g0244 133 Pfam Cytochrome b5-like Heme/Steroid binding domain 8 79 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0244 Cmu-Chr7:2439450 Cmu08g0990 Cmu-Chr8:22137338 3.70E-23 dispersed
Cmu11g0205 Cmu-Chr11:2508603 Cmu07g0244 Cmu-Chr7:2439450 9.60E-16 transposed
Cmu05g0363 Cmu-Chr5:3084850 Cmu07g0244 Cmu-Chr7:2439450 4.70E-50 wgd
Cmu06g0773 Cmu-Chr6:9444374 Cmu07g0244 Cmu-Chr7:2439450 3.00E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0244 K23490 - csv:101212882 260.766