Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0281 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAAATCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATCTGCCAATGCTAGTGGGGAACTTGTCTCAAATAGAATGGCACCCACTGTTAAAGCGATTCCTCCACCACCGCCGCCACCACCTTTTTCTCTATCACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCCCCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCCCCGCCTCCGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCCGTAGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTTTGGTGCTCCTCCACCTCCGCCTCCACCTCCACCTATAGTTCCAAAATCTTCTATTGCTCCTCCACCTCCGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTCCTCCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCTTCCATCTCCGCCTCTGCCTCCGCCTCCACCTCCGCTTCTAAAATCATCCAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTTCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTTCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAAGTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCCGCAAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTCGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGATGGTGCCATCTCTGCTGGTTTCCAGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAATGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCGGTTAAAGCAAAGTTTGAATGTGAATATCAGATTTGTGATTCATGGACTTCCATCAAGCTGAACATGAGGCAATTTTGTTCCCAGAGGTTCGAGTGTTCTGTTGATCTCAACTTGACATTGTCATTATGGTAA 4026 44.34 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTNPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPSANASGELVSNRMAPTVKAIPPPPPPPPFSLSHNKPHVETSFGSDLTTVTMHGRPPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPPPLVPKSFGAPPPPPPPPPVVPKSFGAPPPPPPPPPPPIVPKSFGAPPPPPPPPPIVPKSSIAPPPPPPPPVSKSSNAPPPPPPPPPFLKSSNALPSPPLPPPPPPLLKSSSAPPPPPPPPPSKSSSALPPPPPPPPPKSSSALPPPPPPPPPPSIPKLSGASPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSSRPPPPPPPAKPFNAHPPTSHGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISAGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKFECEYQICDSWTSIKLNMRQFCSQRFECSVDLNLTLSLW 1341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2802147 2813319 + CmPI595203_07g002810.1 Cmu07g0281 419832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0281 1341 SUPERFAMILY Formin homology 2 domain (FH2 domain) 909 1289 - -
Cmu07g0281 1341 PANTHER FORMIN-J 798 1294 IPR051144 -
Cmu07g0281 1341 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 578 593 - -
Cmu07g0281 1341 Pfam Formin Homology 2 Domain 901 1271 IPR015425 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 560 574 - -
Cmu07g0281 1341 ProSiteProfiles Formin homology-2 (FH2) domain profile. 896 1296 IPR015425 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 950 969 - -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 543 558 - -
Cmu07g0281 1341 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 489 901 - -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 594 610 - -
Cmu07g0281 1341 Gene3D - 197 342 - -
Cmu07g0281 1341 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 830 878 - -
Cmu07g0281 1341 SMART PTEN_C2_2 198 338 IPR014020 -
Cmu07g0281 1341 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 489 536 - -
Cmu07g0281 1341 SMART it6_source 515 1335 IPR015425 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 406 431 - -
Cmu07g0281 1341 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Cmu07g0281 1341 FunFam Formin-like protein 895 1282 - -
Cmu07g0281 1341 Coils Coil 1177 1204 - -
Cmu07g0281 1341 Gene3D Formin, FH2 domain 898 1282 IPR042201 -
Cmu07g0281 1341 MobiDBLite consensus disorder prediction 611 823 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1291 Cmu-Chr6:24087381 Cmu07g0281 Cmu-Chr7:2802147 5.80E-254 dispersed
Cmu06g1648 Cmu-Chr6:27607055 Cmu07g0281 Cmu-Chr7:2802147 2.10E-203 dispersed
Cmu07g0281 Cmu-Chr7:2802147 Cmu05g1671 Cmu-Chr5:26685547 1.40E-258 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0281 K28090 - csv:101217517 1050.81