Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g0281 | ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAAATCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATCTGCCAATGCTAGTGGGGAACTTGTCTCAAATAGAATGGCACCCACTGTTAAAGCGATTCCTCCACCACCGCCGCCACCACCTTTTTCTCTATCACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCCCCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCCCCGCCTCCGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCCGTAGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTTTGGTGCTCCTCCACCTCCGCCTCCACCTCCACCTATAGTTCCAAAATCTTCTATTGCTCCTCCACCTCCGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTCCTCCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCTTCCATCTCCGCCTCTGCCTCCGCCTCCACCTCCGCTTCTAAAATCATCCAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTTCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTTCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAAGTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCCGCAAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTCGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGATGGTGCCATCTCTGCTGGTTTCCAGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAATGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCGGTTAAAGCAAAGTTTGAATGTGAATATCAGATTTGTGATTCATGGACTTCCATCAAGCTGAACATGAGGCAATTTTGTTCCCAGAGGTTCGAGTGTTCTGTTGATCTCAACTTGACATTGTCATTATGGTAA | 4026 | 44.34 | MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTNPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPSANASGELVSNRMAPTVKAIPPPPPPPPFSLSHNKPHVETSFGSDLTTVTMHGRPPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPPPLVPKSFGAPPPPPPPPPVVPKSFGAPPPPPPPPPPPIVPKSFGAPPPPPPPPPIVPKSSIAPPPPPPPPVSKSSNAPPPPPPPPPFLKSSNALPSPPLPPPPPPLLKSSSAPPPPPPPPPSKSSSALPPPPPPPPPKSSSALPPPPPPPPPPSIPKLSGASPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSSRPPPPPPPAKPFNAHPPTSHGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISAGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKFECEYQICDSWTSIKLNMRQFCSQRFECSVDLNLTLSLW | 1341 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2802147 | 2813319 | + | CmPI595203_07g002810.1 | Cmu07g0281 | 419832 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g0281 | 1341 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 909 | 1289 | - | - | |
Cmu07g0281 | 1341 | PANTHER | FORMIN-J | 798 | 1294 | IPR051144 | - | |
Cmu07g0281 | 1341 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 200 | 339 | IPR035892 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 578 | 593 | - | - | |
Cmu07g0281 | 1341 | Pfam | Formin Homology 2 Domain | 901 | 1271 | IPR015425 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 560 | 574 | - | - | |
Cmu07g0281 | 1341 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 896 | 1296 | IPR015425 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 950 | 969 | - | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 543 | 558 | - | - | |
Cmu07g0281 | 1341 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 19 | 187 | IPR029021 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 489 | 901 | - | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 594 | 610 | - | - | |
Cmu07g0281 | 1341 | Gene3D | - | 197 | 342 | - | - | |
Cmu07g0281 | 1341 | ProSiteProfiles | C2 tensin-type domain profile. | 200 | 339 | IPR014020 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 830 | 878 | - | - | |
Cmu07g0281 | 1341 | SMART | PTEN_C2_2 | 198 | 338 | IPR014020 | - | |
Cmu07g0281 | 1341 | Pfam | C2 domain of PTEN tumour-suppressor protein | 198 | 338 | IPR014020 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 489 | 536 | - | - | |
Cmu07g0281 | 1341 | SMART | it6_source | 515 | 1335 | IPR015425 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 406 | 431 | - | - | |
Cmu07g0281 | 1341 | Gene3D | Protein tyrosine phosphatase superfamily | 16 | 191 | IPR029021 | - | |
Cmu07g0281 | 1341 | FunFam | Formin-like protein | 895 | 1282 | - | - | |
Cmu07g0281 | 1341 | Coils | Coil | 1177 | 1204 | - | - | |
Cmu07g0281 | 1341 | Gene3D | Formin, FH2 domain | 898 | 1282 | IPR042201 | - | |
Cmu07g0281 | 1341 | MobiDBLite | consensus disorder prediction | 611 | 823 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g1291 | Cmu-Chr6:24087381 | Cmu07g0281 | Cmu-Chr7:2802147 | 5.80E-254 | dispersed | |
Cmu06g1648 | Cmu-Chr6:27607055 | Cmu07g0281 | Cmu-Chr7:2802147 | 2.10E-203 | dispersed | |
Cmu07g0281 | Cmu-Chr7:2802147 | Cmu05g1671 | Cmu-Chr5:26685547 | 1.40E-258 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g0281 | K28090 | - | csv:101217517 | 1050.81 |