Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0291 ATGACTCTATTTTCATTCTCATTCTTGTTCGTAGTACTTCTTCAGTTATCTTTTCTGTTTAATAGTCTGACTGCCAAAAACGGCGACCACCACCACCACCACCTCCGATCACCAGGACTGAATACGAACCCGAACCCGCGACTCCATCAAGCATTCCTTGCTCTCCAAGCATGGAAAAAAGTCATTTACTCGGACCCAAAAAACCACACTACCAATTGGGTGGGGCCATCAGTTTGCAACTACTTTGGAGTGTATTGTGCCCCATCTCTTGATGACCCAAAAATCCAAGTGGTCGCCGGAATTGACTTAAACCACGGCGACATCGCCGGATTCCTCCCTAACGAATTGGGCCTTTTAACAGATCTTGCTCTGCTTCATCTCAACAGCAACCGATTCTGTGGCATTTTGCCACAATCTTTAGCCAATTTATCTCTTCTCTTTGAATTAGATTTAAGCAACAACAGATTCGTAGGCCCTTTTCCTTCTGTTGTTCTTCTCCTTCCAAAATTAACATATCTTGATCTTCGATTCAACGAATTTGAAGGCCCAATTCCCTCTGAACTCTTCAACAAAACCCTCGACGCCATTTTTATCAACAGCAATCGTTTCACCAACATTATCCCACGAAACATCGGTGGAAAATCTGCCTCTGTGATTGTCTTTGCTAACAACAATTTAAAGGGTTGTCTTCCACCCACAATTGCAAGTTTCGCAAACAGTTTAGAAGAGCTTTTGTTGATCAACACTAGTTTATCTGGCTGTTTGCCACAAGAAATTGGGTTTTTGTATAAATTGAAGGTTTTGGATGTGAGTTTTAACAAATTAATGGGTCCTTTGCCTTATAGTTTAGCTGGGTTAGCTCAATTGGAGCAATTGAATTTAGCCCATAATTTGTTTAGTGGGAATTTGTATGAAGGTATCTGTAGCCTTCCGAATTTGGAGAATGTGACAGTTTCTTATAATTACTTTTGTGAAGAAGAAGGGATTTGCCGGAATTTGACGGCGAAAGGGATTGCTTTTGATGATCGGCGGAATTGCTTGCCGGAGAAGCCGTTGCAGAGGAGTAAAAAGGAGTGTAGTGCGGTGGTTGAGCGTCCTGTGGACTGTTTTGAGCATCCGTGCGGCGGCGGCGGAGGTAATGGTTCTAGTATTGCGGCGGTTCCGGCTCCGACGCCAATTTCTTCACCTTCTTCCTTTGTTGCCCCTTCCCACTTGTGA 1218 43.6 MTLFSFSFLFVVLLQLSFLFNSLTAKNGDHHHHHLRSPGLNTNPNPRLHQAFLALQAWKKVIYSDPKNHTTNWVGPSVCNYFGVYCAPSLDDPKIQVVAGIDLNHGDIAGFLPNELGLLTDLALLHLNSNRFCGILPQSLANLSLLFELDLSNNRFVGPFPSVVLLLPKLTYLDLRFNEFEGPIPSELFNKTLDAIFINSNRFTNIIPRNIGGKSASVIVFANNNLKGCLPPTIASFANSLEELLLINTSLSGCLPQEIGFLYKLKVLDVSFNKLMGPLPYSLAGLAQLEQLNLAHNLFSGNLYEGICSLPNLENVTVSYNYFCEEEGICRNLTAKGIAFDDRRNCLPEKPLQRSKKECSAVVERPVDCFEHPCGGGGGNGSSIAAVPAPTPISSPSSFVAPSHL 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2924466 2925683 - CmPI595203_07g002910.1 Cmu07g0291 419842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0291 405 MobiDBLite consensus disorder prediction 385 405 - -
Cmu07g0291 405 Gene3D Ribonuclease Inhibitor 51 215 IPR032675 -
Cmu07g0291 405 Gene3D Ribonuclease Inhibitor 216 339 IPR032675 -
Cmu07g0291 405 SUPERFAMILY L domain-like 51 325 - -
Cmu07g0291 405 MobiDBLite consensus disorder prediction 387 405 - -
Cmu07g0291 405 FunFam Leucine-rich repeat extensin-like protein 1 52 213 - -
Cmu07g0291 405 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 391 IPR051582 -
Cmu07g0291 405 Pfam Leucine Rich Repeat 146 162 IPR001611 GO:0005515(InterPro)
Cmu07g0291 405 Pfam Leucine Rich Repeat 169 190 IPR001611 GO:0005515(InterPro)
Cmu07g0291 405 Pfam Leucine Rich Repeat 288 310 IPR001611 GO:0005515(InterPro)
Cmu07g0291 405 Pfam Leucine Rich Repeat 124 143 IPR001611 GO:0005515(InterPro)
Cmu07g0291 405 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0534 Cmu-Chr5:4587282 Cmu07g0291 Cmu-Chr7:2924466 3.20E-48 dispersed
Cmu07g0291 Cmu-Chr7:2924466 Cmu11g0242 Cmu-Chr11:2917300 5.40E-33 dispersed
Cmu07g0291 Cmu-Chr7:2924466 Cmu06g1076 Cmu-Chr6:20694770 2.40E-33 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0291 - - - 0.0