Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0296 ATGACCACCGGAAGGGAAATTCTCCACAAGATGAAGGTGAAGGCAGGGTTTTGTTCATCAGCAGCAGCTGATACAGGGAAAGGCAAAGGCAAATTGACGACAAATAATAATAATAATAATAATAAGAATATAAGCCATGGGAGTTATTTGGTGAAGGGAAAAGGCAACCATCCAATGGAAGATTACTTGGTTTCCGATTTCAAGCGAGTCAAAGAACATGATTTGGGTTTGTTTGCCATTTTCGATGGCCATTTGGGCCACGATGTTGCTAATTTCTTGCAAAATAATCTCTTTCATAACATCCTCAAAGAGGCTGATTTCTGGGGCGAAACAAGAAAAGCCATAAAAAGAGCTTACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCCGTAACCGCGATCTTGATCGACGGCCACAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAGAAACGGCGTCGCCGAGCAACTTTCCGTTGACCACGAACCCACCAAAGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTTCCACGTGTCGACGGACAATTGGCGGTGGCCAGAGCATTTGGAGATAAGAGTTTAAAAGTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGACGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATATGGAAGGTGATGACAAACCAAGAAGCAGTAGAATCAATTAGACATATAAAGGATGCGAACATAGCGGCCAGACGACTTATCGACGAAGCAGTGTCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCGATGA 882 43.31 MTTGREILHKMKVKAGFCSSAAADTGKGKGKLTTNNNNNNNKNISHGSYLVKGKGNHPMEDYLVSDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWGETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDGHKLVVANVGDSRAVLCRNGVAEQLSVDHEPTKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKVHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHIKDANIAARRLIDEAVSRKSKDDISCIVVRFR 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2955514 2958820 + CmPI595203_07g002960.1 Cmu07g0296 419847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0296 293 FunFam Probable protein phosphatase 2C 39 36 293 - -
Cmu07g0296 293 MobiDBLite consensus disorder prediction 29 45 - -
Cmu07g0296 293 Gene3D - 27 293 IPR036457 -
Cmu07g0296 293 SMART PP2C_SIG_2 50 292 IPR001932 -
Cmu07g0296 293 CDD PP2Cc 44 292 IPR001932 -
Cmu07g0296 293 MobiDBLite consensus disorder prediction 24 45 - -
Cmu07g0296 293 ProSiteProfiles PPM-type phosphatase domain profile. 45 292 IPR001932 -
Cmu07g0296 293 SMART PP2C_4 40 290 IPR001932 -
Cmu07g0296 293 Pfam Protein phosphatase 2C 57 285 IPR001932 -
Cmu07g0296 293 PANTHER PROTEIN PHOSPHATASE 40 290 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu07g0296 293 SUPERFAMILY PP2C-like 38 292 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0296 Cmu-Chr7:2955514 Cmu11g1415 Cmu-Chr11:26375805 2.10E-87 dispersed
Cmu01g2465 Cmu-Chr1:36599408 Cmu07g0296 Cmu-Chr7:2955514 3.60E-85 transposed
Cmu06g0702 Cmu-Chr6:8191998 Cmu07g0296 Cmu-Chr7:2955514 7.10E-29 transposed
Cmu08g0589 Cmu-Chr8:18023066 Cmu07g0296 Cmu-Chr7:2955514 3.80E-46 transposed
Cmu11g1788 Cmu-Chr11:29998819 Cmu07g0296 Cmu-Chr7:2955514 1.00E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0296 K17506 - csv:101211399 501.516