Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu07g0315 | ATGGCGTCCATTATTATTTCTCATCTTTTCATTGCTTTTTCCCTGTTAGCCTTCTCAGCCAATGCTCAGCTCTCATCCAGCTTCTACTCAAAAACCTGTCCCAGACTCCAATCAATTGTTCGTGCTGGTATGACCAAAGCTGTTAACAAAGAAAAGCGTATTGGAGCTTCGATCCTTCGCTTGTTTTTCCACGACTGCTTCGTAAATGGGTGCGATGGTTCTATCTTGTTGGATGATACTTCAACATTTACGGGTGAAAAAAATGCATTTCCAAATAGAAACTCAGCTAGAGGCTTCGAAGTAATTGATGACATTAAAACTCAAGTTGAAGCTGCTTGCAATGCCACCGTTTCTTGTGCTGATATTCTTGCTCTTGCCACTCGTGATGGGGTCGTTCTGCTCGGAGGGCCAAATTGGGTTGTACCACTCGGTCGAAGGGACTCAAGGACAGCGAGCGAGAGCGGAGCGAACAGCAACCTTCCGGGACCCGCCTCTGACCTGTCGACACTCATCTCACTATTTGCCGCTCAAGGCCTCAACGCCCGCGACATGACAGCCCTCTCGGGCGCTCACACCATAGGCAATGGCCAATGTCGTTTCTTCCGAACTCGCATCTACAACGAAACCAACATCGATCCCACCTTTGCCACCCAGCGGCAAGAAAATTGTCCGTTCAGCGGCGGCGACTCGAACTTGGCCCCTCTTGACTCAACCAACACTATTTTTGACAACAGATATTATGTAGACCTAACTAATAAGCGTGGCCTGTTTCATTCGGACCAACAACTCTTCAACGGCGGTTCACAAGATGCGTTGGTTCGGACCTACAGTAAAAGTCCTACTGTCTTTAAATCGGATTTTGTAAATGCGATGATCAAGATGGGGAATCTTCGTCCAGCGAGTGGAACCCCCACTGAGATTAGAAAAAATTGTAGGGTGATATTTGTCTTGGTATTGGTGGGCTACTCTTTGTGTTCGGTGCATGTTGTGGCCCTTGGTTCGATTGATCTTCTATTGGAGATGGTCGCCATTGATCGGTTTGGTTTGACCCTTGGGCACCTTGTGGTTGCTAGGTCTAACCTTTGGTTTGGAGGTAATATTCCCAGGCATTCTTTGATTACTTGGCTTGCTATTCAGAATGTGATATCGTATCAGCAGTTAGCATGTCGGCTCTCGCACAGAATCACCGGCACTGACTTCGGACACTACATTCTCCGTGATTCTGCAATGGACTCTGATAAGGAAATGTCATCGACTACTGTAGAAAGTAAGGACGCAGTAACTGGTCACATAATCTCCACTACTATTGGAGGGGAAAATGGCGAGCAAAAACAGACTATTAGCTACATGGCAGAACGTGTTGTTGGTTCTGGATCGTTTGGAATTGTTTTCCAGGCTAAATGCTTGGAAACCGGGGAGACTTTTGCAATAAAGAAAGTCTTACAGGACAGGCGTTATAAAAATCGTGAGCTACAGTTGATGCGCTTGATGGATCATCCAAATGTTGTTTTCTTGAAGCATTGTTTTTTCTCTACAACTAGTAAAGATGAACTCTTCTTAAATCTGGTAATGGAATACGTTCCCGAGACTATGTATCGAGTACTGAAGCACTACTGCAGTATAAACCAGAGGATGCCACTCATCTATGTGAAACTTTACACTTATCAAATCTTCAGGGGGCTAGCTTATATCCACACTGTTCCTGGAGTTTGTCATCGCGATGTAAAGCCTCATAATCTTTTGGTTGATCCTGTCACACATCAGGTCAAGCTTTGTGATTTTGGTAGTGCAAAAGTCCTGGTTAAAGGTGAGGCAAACATCTCTTACATATGCTCCCGGTACTATCGAGCTCCGGAGCTCATATTTGGTGCAACAGAGTATTCTACATCCATCGACATATGGTCAGCTGGTTGTGTTCTTGCAGAGCTGCTTCTAGGCCAGCCATTGTTCCCTGGTGAAAGTGCCGTAGATCAACTGGTTGAAATAATCAAGGTTCTTGGCACTCCAACTCGAGAAGAAATTCGATGCATGAATCCAAATTATACAGATTTTAGGTTTCCTCAGATTAAAGCCCATCCGTGGCACAAGGTCTTCCACAAACGAATGCCACCTGAAGCTATAGATCTTACTTCAAGGCTTCTTCAATATTCGCCTGGTCTCCGGTGCACTGCACTTGAAGCATGTGCGCATCCTTTCTTTGATGAGCTTCGGGAGCCTAATGCCCGCCTTCCCGATGGTCGTCAGTTGCCCCCACTTTTCAACTTTAAACAGGAACTTTCAGGAGCATCACCTGATCTGATAAAGAGGCTCATACCAGAGCATGTTCGGCGGCAGACCGGACTTTCATTCCCCCATCATGCAGGGCTATCAAGCGCCATCGCGGAAGTGGCAGAGAAGAAAAAGCGATCAAATGAATGGATCTCCCATGAGCCAATCAATATGCCAAAGCATGAAAAGTTGGCGGCCGACATTTTAATTTCCCCTTTCCATTCTATTTTTTCTGAGGTTCGTCATTACCCCATCCATCTGTCTAACGAAAATTTGCACTTTAGCCAATGA | 2559 | 45.64 | MASIIISHLFIAFSLLAFSANAQLSSSFYSKTCPRLQSIVRAGMTKAVNKEKRIGASILRLFFHDCFVNGCDGSILLDDTSTFTGEKNAFPNRNSARGFEVIDDIKTQVEAACNATVSCADILALATRDGVVLLGGPNWVVPLGRRDSRTASESGANSNLPGPASDLSTLISLFAAQGLNARDMTALSGAHTIGNGQCRFFRTRIYNETNIDPTFATQRQENCPFSGGDSNLAPLDSTNTIFDNRYYVDLTNKRGLFHSDQQLFNGGSQDALVRTYSKSPTVFKSDFVNAMIKMGNLRPASGTPTEIRKNCRVIFVLVLVGYSLCSVHVVALGSIDLLLEMVAIDRFGLTLGHLVVARSNLWFGGNIPRHSLITWLAIQNVISYQQLACRLSHRITGTDFGHYILRDSAMDSDKEMSSTTVESKDAVTGHIISTTIGGENGEQKQTISYMAERVVGSGSFGIVFQAKCLETGETFAIKKVLQDRRYKNRELQLMRLMDHPNVVFLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYCSINQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPHNLLVDPVTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYSTSIDIWSAGCVLAELLLGQPLFPGESAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLTSRLLQYSPGLRCTALEACAHPFFDELREPNARLPDGRQLPPLFNFKQELSGASPDLIKRLIPEHVRRQTGLSFPHHAGLSSAIAEVAEKKKRSNEWISHEPINMPKHEKLAADILISPFHSIFSEVRHYPIHLSNENLHFSQ | 852 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3091387 | 3101772 | - | CmPI595203_07g003150.1 | Cmu07g0315 | 419866 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu07g0315 | 852 | FunFam | Peroxidase | 27 | 166 | - | - | |
| Cmu07g0315 | 852 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 183 | 193 | IPR019793 | - | |
| Cmu07g0315 | 852 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 418 | 777 | IPR050591 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 182 | 194 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 249 | 266 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 33 | 52 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 233 | 248 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 289 | 302 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Plant peroxidase signature | 57 | 77 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Haem peroxidase superfamily signature | 235 | 250 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Haem peroxidase superfamily signature | 55 | 69 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Haem peroxidase superfamily signature | 183 | 198 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | ProSitePatterns | Protein kinases ATP-binding region signature. | 455 | 479 | IPR017441 | GO:0005524(InterPro) | |
| Cmu07g0315 | 852 | SUPERFAMILY | Heme-dependent peroxidases | 23 | 314 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | CDD | secretory_peroxidase | 23 | 314 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cmu07g0315 | 852 | SMART | serkin_6 | 449 | 733 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cmu07g0315 | 852 | Gene3D | Phosphorylase Kinase; domain 1 | 434 | 528 | - | - | |
| Cmu07g0315 | 852 | ProSiteProfiles | Protein kinase domain profile. | 449 | 733 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cmu07g0315 | 852 | Gene3D | Peroxidase, domain 2 | 161 | 294 | - | - | |
| Cmu07g0315 | 852 | ProSiteProfiles | Plant heme peroxidase family profile. | 23 | 315 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | FunFam | Shaggy-related protein kinase kappa | 529 | 776 | - | - | |
| Cmu07g0315 | 852 | CDD | STKc_GSK3 | 444 | 736 | IPR039192 | - | |
| Cmu07g0315 | 852 | Gene3D | - | 28 | 312 | - | - | |
| Cmu07g0315 | 852 | FunFam | Peroxidase | 161 | 294 | - | - | |
| Cmu07g0315 | 852 | SUPERFAMILY | Protein kinase-like (PK-like) | 448 | 756 | IPR011009 | - | |
| Cmu07g0315 | 852 | Pfam | Protein kinase domain | 449 | 733 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cmu07g0315 | 852 | FunFam | Glycogen synthase kinase-3 beta | 433 | 528 | - | - | |
| Cmu07g0315 | 852 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 570 | 582 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cmu07g0315 | 852 | Pfam | Peroxidase | 40 | 278 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu07g0315 | 852 | Gene3D | Transferase(Phosphotransferase) domain 1 | 529 | 776 | - | - | |
| Cmu07g0315 | 852 | ProSitePatterns | Peroxidases active site signature. | 55 | 66 | IPR019794 | GO:0004601(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu03g0648 | Cmu-Chr3:720534 | Cmu07g0315 | Cmu-Chr7:3091387 | 6.20E-93 | dispersed | |
| Cmu04g1117 | Cmu-Chr4:25777009 | Cmu07g0315 | Cmu-Chr7:3091387 | 2.50E-63 | dispersed | |
| Cmu07g0315 | Cmu-Chr7:3091387 | Cmu10g2165 | Cmu-Chr10:27700712 | 3.30E-181 | dispersed | |
| Cmu01g2324 | Cmu-Chr1:35422339 | Cmu07g0315 | Cmu-Chr7:3091387 | 5.60E-195 | wgd | |
| Cmu02g1778 | Cmu-Chr2:31662156 | Cmu07g0315 | Cmu-Chr7:3091387 | 1.10E-204 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 75646 | PF00069 | Pkinase | 2.10E-61 | CL0016 | Cmu | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu07g0315 | K14502 | - | cit:102626148 | 725.317 |