Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0331 ATGTCTTCTTCTTCTCCATCCACTCTCTTCTGCGCCGTAATTTCGTTTCTAATCTCCATTTCCATCTCAGTCTCAGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACCAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCTCTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCCCTTTACCCTTTCAAAATTCCCATCCATTTTTCCAATTCTTCATTTTCCTTTGCAACTTCCTTCATTTTCTCTGTTGCCCCTCAGCCAAATCTTCTCCCTGGCCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAACGGCACCAGCTCGGCTCAGCATTTGGGGCTGTTCAATTTCACCAATAATGGCAGCCCCAATAACCATGTCTTCGCTGTTGAGTTCGATTCGTTCCAAAATCAGGAGTTCAATGACACTAATGATAACCACGTGGGCGTGGATTTGAATTCTCTTGAATCTACTGTTTCCTCAGCAGCTGGGTTTTGGAGTGGACCAGATGATGCAGAATTCAAGGTATTGAAGATCAATAACGGAGAAACTTATCAGGTTTGGGTTGACTGTCTAGATTCTTTAGTTAATATTACTATGGCAGAACTTGGAATGAAAAGGCCTAGAAGGCCATTGATATCTCTGTCTGTTAATTTTTCTGGATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACAGGGCAATTAGTTCAAAGCCATAAGATATTATCTTGGAGTTTTAGTACCTCTAACTTGTCTATTGCTGATTCTTTACTGATAACGAATTTGCCTTCTTTTGTTCCTCAAAAGGAGGACGCCACTTTTGAATCAATAGCTTTCATATTGGGGATAACTCTTGGGGGAGCTGGACTTGTGATTATCTGTAGTTTTGTAATCTATGTTGCTGTAGTTGTCAAAAGGAGGGGAAGAAAGAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTAGAATATTGGCCTCATCGGTTTGCTTATGAAGATGTTTATGAAGCAACTGATGGATTCTCAGAAGCCAATGTAATTGGGTTTGGGCGAAATGGTAAGGTCTATAAAGGGACATTAGGGAGATCAAAAGTTGCTGTAAAGAGAATCTCTGTTGAAGTTGAGAGTGGAATGAGAGAGTTTGTAGCTGAGATTTCAAGCTTAGGAAGATTACAGCATAGAAATCTAGTAAAGCTTATAGGATGGTGTAAGAAGGAGAAAGGAAGTTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAAAAAACTATTTGAGTGTGATGAGAATGAAATGTTAAGTTGGGAGAAAAGGATAAAAGTTTTGAGAGATGTAGCCACAGGGTTGCTATATCTACACCAAGGTTGGGATTCCAAGGTTCTGCATAGAGATATAAAGGCGAACAACGTGCTACTAGACAAGGACATGAATGCTAGGTTAGGAGACTTTGGGTTGGCTCGAATGCAACCCCATGAACGAACAGCAGACACAACTCGTGTAATGGGGACTGTCGGGTATATGGCACCAGAGGTGGTTCGAACAGGGCGAGTATCTGCACAAGCGGATGTTTTCGGGTTCGGAGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAATAGAAGAAGGGAAGCCATGGTTAATAGATTGGGTTAGAGGATTAGTGGAGAGGAATGAGATTGGATTAGCAGTTGATGAGAGATTGAAAGTTGAGGGTATAAGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGGTTATTATGTGCTCATAATGAAGCTGGTGCAAGGCCAACAATGCAACAAGTTGTGAATATTTTGTGTGAGAGAAATGGAAATGGTTCAAATGATGGATTGTTAAATAGATTAAGATCAACAAGAATACTGTCTGAGATTTACCAAGGCAACAACTTTCAGCAACATCATCCAACGTTTGAAGAAATCAAAACATCTTCATCTTCAACATCACTCATTGAATCAGATATTTTAAGGAGTGGCCGCTAG 2055 40.63 MSSSSPSTLFCAVISFLISISISVSATEFVFNTNFTSTNTLLFGNATIDSSLLILTRDSPFTIGRALYPFKIPIHFSNSSFSFATSFIFSVAPQPNLLPGHGFAFLFTPFTGINGTSSAQHLGLFNFTNNGSPNNHVFAVEFDSFQNQEFNDTNDNHVGVDLNSLESTVSSAAGFWSGPDDAEFKVLKINNGETYQVWVDCLDSLVNITMAELGMKRPRRPLISLSVNFSGLLLDEMYVGFTAATGQLVQSHKILSWSFSTSNLSIADSLLITNLPSFVPQKEDATFESIAFILGITLGGAGLVIICSFVIYVAVVVKRRGRKKPKDDEIEDWELEYWPHRFAYEDVYEATDGFSEANVIGFGRNGKVYKGTLGRSKVAVKRISVEVESGMREFVAEISSLGRLQHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECDENEMLSWEKRIKVLRDVATGLLYLHQGWDSKVLHRDIKANNVLLDKDMNARLGDFGLARMQPHERTADTTRVMGTVGYMAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAIEEGKPWLIDWVRGLVERNEIGLAVDERLKVEGISGNEIDEMERMVCLGLLCAHNEAGARPTMQQVVNILCERNGNGSNDGLLNRLRSTRILSEIYQGNNFQQHHPTFEEIKTSSSSTSLIESDILRSGR 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3252650 3254704 - CmPI595203_07g003310.1 Cmu07g0331 419882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0331 684 CDD lectin_legume_LecRK_Arcelin_ConA 27 262 IPR001220 GO:0030246(InterPro)
Cmu07g0331 684 Gene3D Phosphorylase Kinase; domain 1 339 429 - -
Cmu07g0331 684 FunFam L-type lectin-domain containing receptor kinase S.4 430 634 - -
Cmu07g0331 684 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 269 IPR013320 -
Cmu07g0331 684 Gene3D Transferase(Phosphotransferase) domain 1 430 636 - -
Cmu07g0331 684 SMART serkin_6 354 623 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0331 684 Pfam Legume lectin domain 28 264 IPR001220 GO:0030246(InterPro)
Cmu07g0331 684 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524(InterPro)
Cmu07g0331 684 Gene3D - 25 272 - -
Cmu07g0331 684 FunFam L-type lectin-domain containing receptor kinase V.9 25 269 - -
Cmu07g0331 684 Pfam Protein kinase domain 356 559 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0331 684 ProSiteProfiles Protein kinase domain profile. 354 637 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0331 684 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 315 429 - -
Cmu07g0331 684 SUPERFAMILY Protein kinase-like (PK-like) 330 624 IPR011009 -
Cmu07g0331 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0331 684 PANTHER - 29 626 IPR050528 GO:0005886(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1781 Cmu-Chr6:28834879 Cmu07g0331 Cmu-Chr7:3252650 1.20E-130 dispersed
Cmu07g0331 Cmu-Chr7:3252650 Cmu10g2847 Cmu-Chr10:34927983 2.10E-125 dispersed
Cmu03g1211 Cmu-Chr3:6542814 Cmu07g0331 Cmu-Chr7:3252650 5.80E-213 transposed
Cmu11g1728 Cmu-Chr11:29414431 Cmu07g0331 Cmu-Chr7:3252650 4.70E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75648 PF00069 Pkinase 2.50E-44 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0331 - - - 0.0