Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0350 ATGGTGGGCTCTGAGGAGGACTCTGGTACTTCTGGGGCTGCGGCGGTGCAGCTCTCTGGCAGTCGGAAAATGTTCTGGCGCTCGGCTTCATGGTCTGCATCACGTTCCTCACTTCACCATCCTGAAGTGAACAGAGAAGGTGGAGACCCCAATGGGAATCTTGGTGATAGTAATGGACCAAGCCGAATTTTCCCTGCTCCATTAACTCCAAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAGCCTTTGTCGATTGCTCGGCGAAGCTTAGATGAATGGCCGAAGGCGGGGTCAGATGATATCGGCGAGTGGCCACAACCTCCTACTCCGAGTGGCAGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCGACAATTCAGAGAAATCCAGAAAAGAACTGTGGGCTGGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTGGCGGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACATAATGGAATTACTCATGTGTTGAATTGTGTAGGATTCGTATGCCCGGAGTACTTCAAAGATGATTTTGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGGGAAAAAAATGGTAGGGTTTTTGTTCATTGTTGCCAAGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCCAGAGGTATTGCTGACCCGAACATGGGTTTTGCTTGCCAGTTATTGCAGTGCCAAAAGCGGGTCCATGCTTTTCCTCTTAGCCCAAGTTCACTGTTGAGGATGTACAGAATTGCTCCACACTCACCTTATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCGCCCTCAGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTGTTTGGATTGGTAAAAACTGCGAAGCTATCATGGAAAGAGATGCGAGGGGAGCTGTTGTGCAGATTGTTCGGTATGAGAGAGTCCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACAAACTTTTGGGATTCTTTTGCAAACCTATTACCTTTAATGGATAAATCTAACAGTAAAGTTAATCTTGGGGAATTAAAAGTTAAGCCTTATCCAGGGGAGAGGAAAGTTGATTCCTATGATGTGGATTTTGAAATTTTTCAGAAGGCTATTACTGGTGGTTTCGTACCTCCATTTCCTTCATCTGAAAATGAGCATGAAACCCATCTTCCTGTTAGAGAAAGCAGTTGGAGTGTACTTAGGCGTAAGTTTGCCTCTGGAAATATGAAAGAGTTTGTATCAGCTCCTCGAATATCGCTTTCTAGGGTCTATTCAGACTCGTTGATGATGATGCATTTTTCTGCAAAATCTTCATCACCTTCAGCATTTTCTTTATCGTCATCATCTTCTTCTCCTATCTATCTTTCGCCGGACTCTCTCTCTTCTGATTCAAGTTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCTTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAGTTTCCTCATCTCTGTCTAGTTTTTCTAGCATGTCTCTTACCTCATCCAATAGTTCCTCAGAACCTATGCCCAATGGTCCAGAAACTAATGATGCAGTCCCTTTGGAATCAAGTTCTCGCCCATTCTCATTCCCATCTAAAAAGTTCTCACCTTCTCTCGCAGAACGTCGAGGTACTGCAAAATCTCTGACATTGCCTGCAATGCCTAGTAAAATCAAAGCAACAAATAGTGCCTCAAGGTTTCTCGCCACTCAAGAAGATTTAAAGAGGAAAAACAAGACTTCTTACCCTCTTAATGTATCAATTAATATGAAAAATGGCTCAGAGCATATGGATAGGGTTGAAAATGAACAAACAAGTTCCACTCAGAAGTTCAAGAATATTGAAAATGGAATGGACGTAAGGGTAGGTAGTGTGGCCTCGTGCCAGCAGGAAACTAAAGTTGCCGGACAATCTGCTGGTTCCTGGAAAAGCTATCCCAAACTTTTTGGAGAAGGCATGGTATCCAATGTGTCAAATGGAAAGCAAGATGATGAATTTGTGCAACCTATGGTATACTGTTGGCCGGAGTTGGAAAAGATTGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGACCATGATTTATCACAGGTTCATGTAAAGAGGGATAAAGACTTGGTTGATTTAGAACAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACGGAAATAGGTCTACCAGAAAATACAGAAATTAAGATTGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGATCATCAAAGATGGACTTCCCTTACGTAATTTAGTGAGGAGACGCTTGAAAATCCAAGTCGTTTTATAG 2616 42.05 MVGSEEDSGTSGAAAVQLSGSRKMFWRSASWSASRSSLHHPEVNREGGDPNGNLGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPEKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKHNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFVWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLPLMDKSNSKVNLGELKVKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSVLRRKFASGNMKEFVSAPRISLSRVYSDSLMMMHFSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSSMSLTSSNSSSEPMPNGPETNDAVPLESSSRPFSFPSKKFSPSLAERRGTAKSLTLPAMPSKIKATNSASRFLATQEDLKRKNKTSYPLNVSINMKNGSEHMDRVENEQTSSTQKFKNIENGMDVRVGSVASCQQETKVAGQSAGSWKSYPKLFGEGMVSNVSNGKQDDEFVQPMVYCWPELEKIAAFDTSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLSQVHVKRDKDLVDLEQIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLIIKDGLPLRNLVRRRLKIQVVL 871
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3402555 3407222 + CmPI595203_07g003500.1 Cmu07g0350 419901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0350 871 ProSiteProfiles Dual specificity protein phosphatase domain profile. 153 295 IPR020422 GO:0006470(InterPro)
Cmu07g0350 871 Pfam Dual specificity phosphatase, catalytic domain 161 291 IPR000340 GO:0016311(InterPro)
Cmu07g0350 871 CDD DSP 154 288 - -
Cmu07g0350 871 MobiDBLite consensus disorder prediction 570 620 - -
Cmu07g0350 871 Gene3D Severin 304 399 IPR029006 -
Cmu07g0350 871 SMART VILL_6 305 399 IPR007122 GO:0051015(InterPro)
Cmu07g0350 871 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 294 IPR029021 -
Cmu07g0350 871 MobiDBLite consensus disorder prediction 100 120 - -
Cmu07g0350 871 SUPERFAMILY Actin depolymerizing proteins 300 401 - -
Cmu07g0350 871 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 212 273 IPR000387 GO:0016311(InterPro)
Cmu07g0350 871 PANTHER MKPA PROTEIN 16 847 - -
Cmu07g0350 871 ProSitePatterns Tyrosine specific protein phosphatases active site. 237 247 IPR016130 GO:0016311(InterPro)
Cmu07g0350 871 SMART dsp_5 153 292 IPR020422 GO:0006470(InterPro)
Cmu07g0350 871 MobiDBLite consensus disorder prediction 570 604 - -
Cmu07g0350 871 Gene3D Protein tyrosine phosphatase superfamily 136 295 IPR029021 -
Cmu07g0350 871 MobiDBLite consensus disorder prediction 29 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2638 Cmu-Chr5:35006253 Cmu07g0350 Cmu-Chr7:3402555 1.50E-153 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0350 - - - 0.0