Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0391 ATGGCGAATCGATGGTGGGCTGAAAATATACCCACCACCACGGACAGCAGTACCAGCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCTGATGAAGAGAACAACTCGGGAAGCCATGAGAGAGCTGAACCAGGCACCAGTTCAAGCACGCGCCGCCCTCGTGGCCGGCCGCCGGGATCTAAGAACAAGCCGAAGCCACCGGTGGTTGTAACGAAGGAGAGCCCCGATGCCCTCCGGAGCCACGTTTTGGAAATAGGCAGCGGCAGTGACATCGTTGAAAGCATCTCGAACTTCGCCCAGCGCCGGCAGCGAGGAGTTTCAGTTCTTAGCGGAAATGGGGTTGTCGCCAATGTAACTCTCCGGCATCCGGCGGCCCCAGGCGGCGTTATTACACTACAAGGTCGATTTGATATACTGTCGCTCTCTGGTGCTTTTTTGCCTGCCCCAGCTCCGCCGGGTGCAACTGGGTTAACTGTCTACTTGGCTGGCGGACAGGGGCAGGTCGTTGGTGGCATTGTTGTCGGTGCACTTGTTGCAACCGGTCCAGTCATCGTCATCGCTGCCACTTTCACCAATGCAACATTCGAGCGGCTGCCGCTTGAGGACGAGGAGGTGGCTGCGGGAGACAAGTCTGGGACTAGTCAGAACAATTCAACTTCTCAGAGCATGGGGGAGCAACAGCAACAGCAGCAACAACAGCAACAGCAGCCTTCAATGGGAGTTTACAATATGGGTCCAAACTTGGTGCCAAATGGTCAGTGGTGTAGGTGGAACAAGTGGAAGTATGAGTTTGGAGCCACAATATTCTTTGATCAGGTGGTTTGA 834 54.56 MANRWWAENIPTTTDSSTSNPYSTPLKQSLEAADEENNSGSHERAEPGTSSSTRRPRGRPPGSKNKPKPPVVVTKESPDALRSHVLEIGSGSDIVESISNFAQRRQRGVSVLSGNGVVANVTLRHPAAPGGVITLQGRFDILSLSGAFLPAPAPPGATGLTVYLAGGQGQVVGGIVVGALVATGPVIVIAATFTNATFERLPLEDEEVAAGDKSGTSQNNSTSQSMGEQQQQQQQQQQQPSMGVYNMGPNLVPNGQWCRWNKWKYEFGATIFFDQVV 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3988582 3991668 - CmPI595203_07g003910.1 Cmu07g0391 419942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0391 277 CDD DUF296 82 165 IPR005175 -
Cmu07g0391 277 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Cmu07g0391 277 MobiDBLite consensus disorder prediction 1 78 - -
Cmu07g0391 277 MobiDBLite consensus disorder prediction 212 245 - -
Cmu07g0391 277 FunFam AT-hook motif nuclear-localized protein 81 208 - -
Cmu07g0391 277 MobiDBLite consensus disorder prediction 207 246 - -
Cmu07g0391 277 MobiDBLite consensus disorder prediction 43 58 - -
Cmu07g0391 277 PIRSF ESCAROLA 7 270 IPR014476 GO:0003680(InterPro)
Cmu07g0391 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 256 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cmu07g0391 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 208 - -
Cmu07g0391 277 Gene3D - 81 210 - -
Cmu07g0391 277 MobiDBLite consensus disorder prediction 1 35 - -
Cmu07g0391 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 194 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1685 Cmu-Chr2:30704604 Cmu07g0391 Cmu-Chr7:3988582 6.20E-71 dispersed
Cmu05g0484 Cmu-Chr5:4050405 Cmu07g0391 Cmu-Chr7:3988582 3.70E-65 dispersed
Cmu06g0668 Cmu-Chr6:7626063 Cmu07g0391 Cmu-Chr7:3988582 8.60E-54 dispersed
Cmu06g1499 Cmu-Chr6:26272193 Cmu07g0391 Cmu-Chr7:3988582 4.00E-59 dispersed
Cmu07g0391 Cmu-Chr7:3988582 Cmu09g1156 Cmu-Chr9:12476026 7.40E-58 dispersed
Cmu03g1870 Cmu-Chr3:25327771 Cmu07g0391 Cmu-Chr7:3988582 9.20E-37 transposed
Cmu11g0675 Cmu-Chr11:7436826 Cmu07g0391 Cmu-Chr7:3988582 1.70E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0391 - - - 0.0