Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0406 ATGGGGAGCAAGCTAGAGGACCCTGATTCCACTCATCTACAGCATAGGTCGATGTTGGAACAAGTCGTTGGCAGCACGTTTACTCCAGAATCTGTAGTCTACACATACAAGAGAAGTTTCAATGGATTTGCTGTAAAACTCACCGAAGAAGAAGCTGAAAAGATTGCCAGTATGAAGGGTGTGGTGTCTGTGTTTCTAAATGAAAAGAACCAACCTCAAACGACAAGATCATGGGATTTTCTGGGTTTTCCACAAAATGTTCGTCGTGTAAATCAAGTGGAAAGTAGCATTGTTGTTGGAGTTTTGGACCACGGAATCTGGCCAGAGTCTCCCAGTTTCAAAGATGAAAATCTTGGTCCCATACCACCCAGATGGAAGGGCACCTGTGACAAAGCATTCAACTTTACTTGCAACAGAAAAATTATTGGAGCCCGAGCATATCGCATCGGGCGTCCTATTCCCCCTGGTGATGTGGATAGTCCAAGAGATACAGACGACCATGGAACACACACTGCATCAACAGTGGCCGGTGGTCTAGTGAGGCAGGCAAGTTTGTACGGTCTCGGGCTTGGCACGGCGAGAGGAGGTGTTCCGTCCGCGCGCATCGCTATATACAAGATATGTTGGAAGGATGGTTTCTTCGATGCGGACATTCTTGCAGCATATGACGATGCCATTGCCGATGGAGTCGATATTATATCTCTTTCAGTGAATGCGAAGGAAGTGCGGCCTTATTTCAAAGATCCCATTGCCATTGGATCTTTTCAAGCAATGAAAAATGGAATATTAACATCCAATTCTGCTGGAAATTCAGGTCCGAAACTCTTCACCACCACAAGCTTGTCTCCATGGCTTCTTTCTGTTGCTGCAAGTACCATCGACAGGAAGTTTGTTACACAAGTGCAAATTGGCAATGGAAATAGCTTTCAGGTTCGAATTCAGCCCGACCCCAAGCCCAAACACAACGGGCTTAAGTACTATTTAGGCTGGAGTGACATGAGGAAGAGTAAACCCTATAGTGACATAGTTGTTCTCCTAATCGACTACAACTCATCATAA 1059 45.42 MGSKLEDPDSTHLQHRSMLEQVVGSTFTPESVVYTYKRSFNGFAVKLTEEEAEKIASMKGVVSVFLNEKNQPQTTRSWDFLGFPQNVRRVNQVESSIVVGVLDHGIWPESPSFKDENLGPIPPRWKGTCDKAFNFTCNRKIIGARAYRIGRPIPPGDVDSPRDTDDHGTHTASTVAGGLVRQASLYGLGLGTARGGVPSARIAIYKICWKDGFFDADILAAYDDAIADGVDIISLSVNAKEVRPYFKDPIAIGSFQAMKNGILTSNSAGNSGPKLFTTTSLSPWLLSVAASTIDRKFVTQVQIGNGNSFQVRIQPDPKPKHNGLKYYLGWSDMRKSKPYSDIVVLLIDYNSS 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4227049 4233487 + CmPI595203_07g004060.1 Cmu07g0406 419957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0406 352 ProSiteProfiles Serine proteases, subtilase domain profile. 77 352 - -
Cmu07g0406 352 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 310 IPR045051 -
Cmu07g0406 352 SUPERFAMILY Subtilisin-like 72 315 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu07g0406 352 CDD Peptidases_S8_3 71 293 IPR034197 -
Cmu07g0406 352 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 72 IPR037045 -
Cmu07g0406 352 Gene3D - 294 311 - -
Cmu07g0406 352 Gene3D Peptidase S8/S53 domain 97 293 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu07g0406 352 MobiDBLite consensus disorder prediction 153 173 - -
Cmu07g0406 352 Pfam Subtilase family 96 292 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu07g0406 352 Pfam Peptidase inhibitor I9 4 69 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0406 Cmu-Chr7:4227049 Cmu07g0409 Cmu-Chr7:4249993 2.20E-139 dispersed
Cmu07g0405 Cmu-Chr7:4214402 Cmu07g0406 Cmu-Chr7:4227049 1.50E-34 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0406 - - - 0.0