Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0467 ATGACGAATTTACCCTCTCCGGCCGTCGCCGTCACTGTCCTCACCCTCATCGCCGTCGTTTTCCCGTTGTTCCCGGCGATCCAAGCTCTCGGTTCAGCCTCAACCCTTGCTGTCAGCTACAGCTCCGGAACCGTCTGTGGCATCGTCGCCGAGCAGCCGACCCAAAGGATTTTGTGTTTCCGTGACGGTCAAACCATTTTTATTGAACCCCATATCTCGTTCTCCGCCGTATCCGGCGGCCGGAATACCTTCTGCGGTATAAGGTCCGGCGGTTACACCCTCCTCTGCTGGGACTTCGACTCGACCACCGCTACGTTTTCCCGGAGAAGACTTTACTACAGCCCCACCGTTCTTCTGGAGAATCTCGCGCTCGGCGACGAGCAAATCTGCGCCACGTTGGTTGGCGCCGGCAATGTAACTTGCTGGCGAGAAGGTAACAACGCGAGTGTTGGATTTTCTTCTCTTCAATATGACTCAATCTCTTCTGGGTATGGGTTTTCTTGTGGGATTTTGAAAGGGAGTCAATCCATCCGATGTTGGGGTAGAAATTCGTCGATTGCAACCGTAATCGAAAATGGGTTTCGAAATATTTCAATGTTGAGCATCGTGGCCGGTGGGTTTCATGCCTGTGGATTGAATTCCTCTGGTGGGTTGGTTTGTAAAGGGAATAACGATTTTGGGCAGTTGGATTTTCCTTCAAATACATCCATGGGGTTCTCTGAATTAGCACTCGGTGAACGCCATAGCTGTGGGATTTTAGTCTCGAATGGATCAGTGGTTTGTTGGGGCGGCTTGGGATTTTCTGTTGATCCGATTCGAGAAACTTCTTTTGAGTTAATTTCTTCAGGATCTGATTTTGTTTGTGGTTTAACAACGAGTAATTTTTCTGTTCTTTGTTGGGGGCCTGGTTGGTCCAATGATTCTTTCGGTCTTTCTTCACTCTCTCTTCCCAAGATTCTTCCTGGTCCTTGTGTTCAATCTTCTTGTAGTGATTGTGGGGTTTATCCTTTATCTCAAACCCTCTGTTCTAATTCTGGGAATGTCTGTAATCGCTGTTTGTTTACTGCTTCAACGCCGCCACCGCCTCTGCCATCGTCTCCCCCTCCGCAGCGGTTGCCACCGCCAACGGTGAAGGCCGCGTCACCTCCGCCGGCTGCCTTGAGAAAGGGTTTGTTGGCATTTGGTATTGTGGGCTCAGTTGGTGCCTTTGCTGGGATTTGCACTATTGTTTACTGTTTGTGGACTGGTGCTTGTTTTGGGCATAAGAAGATACATAACTCTGTTCAGCCTACCATCACTAGAGCTGCTAGTTCGAATGGTGGAACGACGACTTCAAATACAAACAACAGCCCTCCGTCTCGGTCGTTGACGATACGACGTCAAGGCTCACGGATAATGCGAAGGCAGAGGAGTGGCACCTCATCTAAGCATGCCGATAGAGCAGAAGAATTCACTCTAGCAGAGCTTGCTATGGCTACCAATGATTTCTCTCCTGAGAACAAGATTGGTGAGGGGAGCTTCGGCGTCGTGTACCGAGGGAAACTGTACGATGGCCGGGAAGTTGCGATTAAGAGAGGCGAAACAGGACCGAAAACTAAGAAGTTTCAGGAGAAAGAGAGTGCTTTTGATTCAGAATTGGCATTCTTGTCTAGGCTTCATCACAAGCATTTGGTTAGGCTTGTTGGGTACTGTGAGGAGAAAGATGAGAGACTGTTGGTTTATGAGTATATGAAAAATGGTGCACTTTATAATCATCTTCATGACAAGAACAATTTTGAGAAAGCCAGCAGTGTTATAAACTCTTGGAAAATGAGGATCAAAATTGCTTTAGATGCAGCTAGAGGGATTGAATATCTTCACAACTATGCAGTCCCTCCCATAATCCATAGAGATATCAAATCATCCAACATACTCCTCGACGCGAATTGGACGGCGAGAGTATCTGACTTCGGGTTGTCATTGATGAGTCCAGGGTCGGACCGTGACTACCAACCAACAAAGGCAGCTGGGACGGTTGGTTACATTGATCCTGAGTACTATGGACTGAATGTTTTGACTGCTAAGAGTGATGTGTATGGGCTTGGGGTGGTGTTGTTGGAGCTTTTGACAGGGAAGAGAGCTATATTTAAGGATGATGAACAAGGAGGGACACCGGTCAGCGTGGTCGATTATGCGGTGCCTGTGATTATGGTTGGAGAATTGGTGAAGATTTTGGATCAGAGAGTTGGGCCACCACAGATGAACGAAGCGGAGGCGGTGGAGCTGGTGGCTTACACAGCGATGCATAGTGTGCATTTGGAAGGGAAAGATCGGCCGACGATGACCGACATTGTTGCTAATTTGGAACGAGCTTTGAATCTTTGTGATGATAGCTATGGTAGCATCTCTAGTGGTGGCATTTCCATTGTTTCAGAGTGA 2418 48.1 MTNLPSPAVAVTVLTLIAVVFPLFPAIQALGSASTLAVSYSSGTVCGIVAEQPTQRILCFRDGQTIFIEPHISFSAVSGGRNTFCGIRSGGYTLLCWDFDSTTATFSRRRLYYSPTVLLENLALGDEQICATLVGAGNVTCWREGNNASVGFSSLQYDSISSGYGFSCGILKGSQSIRCWGRNSSIATVIENGFRNISMLSIVAGGFHACGLNSSGGLVCKGNNDFGQLDFPSNTSMGFSELALGERHSCGILVSNGSVVCWGGLGFSVDPIRETSFELISSGSDFVCGLTTSNFSVLCWGPGWSNDSFGLSSLSLPKILPGPCVQSSCSDCGVYPLSQTLCSNSGNVCNRCLFTASTPPPPLPSSPPPQRLPPPTVKAASPPPAALRKGLLAFGIVGSVGAFAGICTIVYCLWTGACFGHKKIHNSVQPTITRAASSNGGTTTSNTNNSPPSRSLTIRRQGSRIMRRQRSGTSSKHADRAEEFTLAELAMATNDFSPENKIGEGSFGVVYRGKLYDGREVAIKRGETGPKTKKFQEKESAFDSELAFLSRLHHKHLVRLVGYCEEKDERLLVYEYMKNGALYNHLHDKNNFEKASSVINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDANWTARVSDFGLSLMSPGSDRDYQPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKDDEQGGTPVSVVDYAVPVIMVGELVKILDQRVGPPQMNEAEAVELVAYTAMHSVHLEGKDRPTMTDIVANLERALNLCDDSYGSISSGGISIVSE 805
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 5062294 5064711 - CmPI595203_07g004670.1 Cmu07g0467 420018
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0467 805 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524(InterPro)
Cmu07g0467 805 ProSiteProfiles Protein kinase domain profile. 496 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0467 805 Pfam Protein kinase domain 498 778 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0467 805 MobiDBLite consensus disorder prediction 435 460 - -
Cmu07g0467 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0467 805 MobiDBLite consensus disorder prediction 360 381 - -
Cmu07g0467 805 SMART serkin_6 496 785 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0467 805 FunFam Serine/threonine-protein kinase-like protein CCR4 577 797 - -
Cmu07g0467 805 FunFam serine/threonine-protein kinase-like protein CCR1 465 576 - -
Cmu07g0467 805 Pfam Regulator of chromosome condensation (RCC1) repeat 201 228 - -
Cmu07g0467 805 SUPERFAMILY RCC1/BLIP-II 65 263 IPR009091 -
Cmu07g0467 805 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 33 794 IPR044815 GO:0004674(InterPro)
Cmu07g0467 805 Gene3D - 76 310 IPR009091 -
Cmu07g0467 805 Gene3D Phosphorylase Kinase; domain 1 458 576 - -
Cmu07g0467 805 SUPERFAMILY Protein kinase-like (PK-like) 477 781 IPR011009 -
Cmu07g0467 805 Gene3D Transferase(Phosphotransferase) domain 1 577 793 - -
Cmu07g0467 805 MobiDBLite consensus disorder prediction 435 479 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0467 Cmu-Chr7:5062294 Cmu05g2669 Cmu-Chr5:35233172 7.20E-61 dispersed
Cmu07g1548 Cmu-Chr7:30693613 Cmu07g0467 Cmu-Chr7:5062294 6.90E-84 transposed
Cmu08g0239 Cmu-Chr8:5357392 Cmu07g0467 Cmu-Chr7:5062294 4.40E-100 transposed
Cmu08g1087 Cmu-Chr8:23144937 Cmu07g0467 Cmu-Chr7:5062294 6.10E-50 transposed
Cmu10g1984 Cmu-Chr10:25508909 Cmu07g0467 Cmu-Chr7:5062294 2.90E-51 transposed
Cmu03g0695 Cmu-Chr3:1170705 Cmu07g0467 Cmu-Chr7:5062294 3.10E-183 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75649 PF00069 Pkinase 1.30E-44 CL0016 Cmu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0467 - - - 0.0