Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0469 ATGGCTTCAATCTCTTCCAGCCCTCGTTCCGTTGAAGACATCTTCAAGGATTACAACGCTCGACGCACAGGCCTTGTGCGAGCCCTCACTTATGATGTCGATGAGTTCTACTCGCTTTGCGATCCTGAGAAGGAGAATTTGTGTTTGTATGGACATCCGAATGAGTCTTGGGAGGTGACTCTGCCTGCCGAGGAAGTTCCATCCGAGCTCCCTGAACCCGCGTTGGGGATCAATTTTGCAAGAGATGGGATGAAGCGTAGAGACTGGCTTTCGTTGGTGGCTGTGCACAGCGATTGTTGGTTGCTTTCAGTGGCGTTCTATTTTGGTGCTCAACTCAACCGTAATGAGCGGTCCGTTTTACCTGAGTTTGATCTCTTATTCTGTTGTGGTATACTGTCAGTTGGGAAAGTGGAAAAGGTCATGTTCTTCTTGTCATTGTGA 441 48.53 MASISSSPRSVEDIFKDYNARRTGLVRALTYDVDEFYSLCDPEKENLCLYGHPNESWEVTLPAEEVPSELPEPALGINFARDGMKRRDWLSLVAVHSDCWLLSVAFYFGAQLNRNERSVLPEFDLLFCCGILSVGKVEKVMFFLSL 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5108526 5109586 + CmPI595203_07g004690.1 Cmu07g0469 420020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0469 146 PANTHER CPG BINDING PROTEIN 7 120 IPR045104 GO:0000976(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0042393(InterPro)
Cmu07g0469 146 Pfam Alfin 10 120 IPR021998 GO:0006355(InterPro)|GO:0042393(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0469 Cmu-Chr7:5108526 Cmu11g0156 Cmu-Chr11:2049808 2.40E-47 dispersed
Cmu10g2914 Cmu-Chr10:35499727 Cmu07g0469 Cmu-Chr7:5108526 2.40E-52 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0469 K26274 - csv:101211934 245.743