Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g0502 | ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA | 501 | 47.9 | MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPNCPQIHSDDKPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5808766 | 5809706 | + | CmPI595203_07g005020.1 | Cmu07g0502 | 420053 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g0502 | 166 | Coils | Coil | 85 | 105 | - | - | |
Cmu07g0502 | 166 | ProSiteProfiles | LOB domain profile. | 5 | 106 | IPR004883 | - | |
Cmu07g0502 | 166 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 4 | 115 | - | - | |
Cmu07g0502 | 166 | Pfam | Lateral organ boundaries (LOB) domain | 6 | 103 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g0874 | Cmu-Chr1:10699749 | Cmu07g0502 | Cmu-Chr7:5808766 | 1.50E-45 | dispersed | |
Cmu02g1848 | Cmu-Chr2:32398445 | Cmu07g0502 | Cmu-Chr7:5808766 | 2.60E-45 | dispersed | |
Cmu03g0856 | Cmu-Chr3:3070977 | Cmu07g0502 | Cmu-Chr7:5808766 | 2.50E-35 | dispersed | |
Cmu03g0858 | Cmu-Chr3:3099391 | Cmu07g0502 | Cmu-Chr7:5808766 | 9.00E-37 | dispersed | |
Cmu07g0502 | Cmu-Chr7:5808766 | Cmu09g2153 | Cmu-Chr9:37633605 | 6.00E-39 | dispersed | |
Cmu05g0881 | Cmu-Chr5:8005628 | Cmu07g0502 | Cmu-Chr7:5808766 | 2.40E-31 | transposed | |
Cmu02g1926 | Cmu-Chr2:33169525 | Cmu07g0502 | Cmu-Chr7:5808766 | 1.10E-48 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6498 | PF03195 | LOB | 3.70E-42 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g0502 | - | - | - | 0.0 |