Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0502 ATGGGTGGCAATTCACCGTGCGCCTCGTGCAAACTCCTCCGGCGACGGTGCGCCAAAGACTGCATTTTTGCTCCCTATTTTCCCTCTGATGACCCCCACAAGTTTGCTATTGTCCATAAAGTTTTTGGTGCCAGCAATGTCAGCAAAATGTTGCAGGAACTGCCAGTGCAGCAAAGAGGCGACGCCGTGATGAGTTTAGTTTATGAGGCAAGTGCAAGAGTGAGGGACCCAGTTTATGGTTGTGTAGGGGCAATTTCGTACTTACAAAATCAAGTTTCACAACTACAAATGCAATTGGCTGTGGCTCAAGCTGAGATTCTTTGCATCCAAATGCAACAAGACAACCCCGTTTTCCCAAATTGCCCTCAGATCCACTCCGATGACAAACCCTCCTCTCTTCTACTCCCGCCGCCGTCTCCTCCGCCCTCTCAGTGCCTCAATTTTGCTTCCTCTCCCAATGTAATTTATGACACCATTTTTGGACATGACATAGTTTCTTAA 501 47.9 MGGNSPCASCKLLRRRCAKDCIFAPYFPSDDPHKFAIVHKVFGASNVSKMLQELPVQQRGDAVMSLVYEASARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQQDNPVFPNCPQIHSDDKPSSLLLPPPSPPPSQCLNFASSPNVIYDTIFGHDIVS 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5808766 5809706 + CmPI595203_07g005020.1 Cmu07g0502 420053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0502 166 Coils Coil 85 105 - -
Cmu07g0502 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Cmu07g0502 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 115 - -
Cmu07g0502 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0874 Cmu-Chr1:10699749 Cmu07g0502 Cmu-Chr7:5808766 1.50E-45 dispersed
Cmu02g1848 Cmu-Chr2:32398445 Cmu07g0502 Cmu-Chr7:5808766 2.60E-45 dispersed
Cmu03g0856 Cmu-Chr3:3070977 Cmu07g0502 Cmu-Chr7:5808766 2.50E-35 dispersed
Cmu03g0858 Cmu-Chr3:3099391 Cmu07g0502 Cmu-Chr7:5808766 9.00E-37 dispersed
Cmu07g0502 Cmu-Chr7:5808766 Cmu09g2153 Cmu-Chr9:37633605 6.00E-39 dispersed
Cmu05g0881 Cmu-Chr5:8005628 Cmu07g0502 Cmu-Chr7:5808766 2.40E-31 transposed
Cmu02g1926 Cmu-Chr2:33169525 Cmu07g0502 Cmu-Chr7:5808766 1.10E-48 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6498 PF03195 LOB 3.70E-42 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0502 - - - 0.0