Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0520 ATGGCAGCACAAGATCTTCCAGAAGCAAGGGCAGCCCTCAGCCTCCTCCGCAGTAGACTCTGCAACTCTAGTTTCTATTTCAAACCTCCATCCGATTCTTCTGATAGCAATTACAGCAAATTGAAGTTTATAATATCCAGTTCGGTGGCTGAAGCGTGTAATAATTCGATCCTGCTTCTTGGCCCCCGGGGTTCAGGGAAAATGGCGGTGCTGGAACTCGTTCTACAAGATCTATTGCTAGAATATCCCGATATGATTACCGTGATAAAATTGAGTGGTCTTTTGCATTGTGACGACAATGGTGCCTTCAAGGAGATTGCTAGGCAGCTTTGTTCAGAGTATCAATTATTGTTCTCAAAACTGGCATCCTTCGACGATAACTCCCAGTTTATGATAGCTATGCTTCGGGAGTGTGGCTTGGCACACAAGACAATTGTTTTTGTACTCGATGAATTTGATCTTTTTGCACAAGGAAAACAACGGTTACTTTATAGTTTGTTAGATGCCATGCAATCAGTGTCATCACAAGCTGTTGTTATTGGCATCAGTTGTCGATTGGATGCTGATCAGCTACTCGAGAAAAGAGTAAGATCTCGGTTCTCCCATAGAAAGCTGTTATTTCTTCCTCCCTGCAAGGAAGATGTGGAGAGATTGCTGGAGCACATTTTAACATTGCCAATAGACTCGGACCTTCCTCACGACTACATTATTAAATTTAATGCAAAGCTTCATAATATGTTAGCAAATGAGAGATTTAAAAAGATCATTAACACTTATTTGGACTCTGATTCGACCGTCAAACAATTAGTGAGATATCTGTTTTGTGCCATATCAAAGATGGACTTGAAATCTGGGTTGCTGACCCTTGAGAATTTTGAACATGCTCTTTCGGATATTCAGAGGCAGCCAAAGCAGGAATATATAAAAGATTGTTCCATATTGGAGCTCTATATTCTGGTATGCATGAAAAGGTTGGAAGTTAAGGAGCAGAATTCGTATAACTTCAATTCTGTAATGAAAGAGTATAAGAGTATACATGATTCATTCCGGACATCTGATTATTATTCACGAAGTGTATGCTTACGGGCTTTTGAGCACCTTCTACAGCGTGAATTGATCTGTTTCACTGACAACCGTGGACATAATCAATCAGTTGAATTTCGACCAGTCAAGCTGTTAATAACATCTCATGAACTACATCATGGACTGAAGGCGTATCGTTCATGTCCTATTACATGTCAACTCTTAATTTACTGTTGTTCGTGTACTTCCATCAATGTTGTAGTGACTCTGAAGATGGCTGTGCGTCTTTTCTCCTATGGTTTCAGACCTTTCGTCTTGTTCAAGGAGGCTCAGATCAGCGGTAAGGCCCTTATGCGTCAATTTCGAGTTCGAGGTCCGAATGTTGCTATTGGAAAGCTGAGATTGTGGTTGATTACTACTAAAGGGTAG 1452 40.77 MAAQDLPEARAALSLLRSRLCNSSFYFKPPSDSSDSNYSKLKFIISSSVAEACNNSILLLGPRGSGKMAVLELVLQDLLLEYPDMITVIKLSGLLHCDDNGAFKEIARQLCSEYQLLFSKLASFDDNSQFMIAMLRECGLAHKTIVFVLDEFDLFAQGKQRLLYSLLDAMQSVSSQAVVIGISCRLDADQLLEKRVRSRFSHRKLLFLPPCKEDVERLLEHILTLPIDSDLPHDYIIKFNAKLHNMLANERFKKIINTYLDSDSTVKQLVRYLFCAISKMDLKSGLLTLENFEHALSDIQRQPKQEYIKDCSILELYILVCMKRLEVKEQNSYNFNSVMKEYKSIHDSFRTSDYYSRSVCLRAFEHLLQRELICFTDNRGHNQSVEFRPVKLLITSHELHHGLKAYRSCPITCQLLIYCCSCTSINVVVTLKMAVRLFSYGFRPFVLFKEAQISGKALMRQFRVRGPNVAIGKLRLWLITTKG 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6063404 6068519 + CmPI595203_07g005200.1 Cmu07g0520 420071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0520 483 FunFam Origin of replication complex subunit 4 35 209 - -
Cmu07g0520 483 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 218 402 IPR032705 -
Cmu07g0520 483 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 9 412 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Cmu07g0520 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 300 IPR027417 -
Cmu07g0520 483 PIRSF ORC4 5 419 IPR016527 GO:0000808(InterPro)|GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
Cmu07g0520 483 Pfam AAA domain 55 181 IPR049945 GO:0016887(InterPro)
Cmu07g0520 483 Gene3D - 34 209 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0520 K02606 - csv:101220845 773.467