Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0551 ATGGATGTTTTCAATATTCATTTCCAAAACACTTTGTCCTCCATTGAAGAACAACCTAGAAGGAATTTTGGACACCATTGTAGTTCACCTTGTGTTTGTTTGTGTGCATTCTTCTCTTCTTTGAAGAACAAAGGCCAAACGGGGAATACAGATGAGGGGTTTTCTCTTGGAGATCGAGATAAAGACGCTATGGATCTTGAGCATGGGAAGTGTTGGGATAGTTCAAAGAAGGATTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGCCTTGGTGTCGTCTATGGCGATTTGAGCATCTCTCCTCTTTACGTTTACAGAAGCACTTTTGCTGAAGACATCCAACATTCAGATACCAATGAAGAAATCTATGGTGTTCTTTCATTTGTCTTCTGGACTCTCACTATAGTCCCCCTTTTCAAATACGTCTTTGTGGTTCTCAGAGCTGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCGTTAATTTGTAGACATGCCAAAGTAAGCCTTCTCCCCAACAGACAAGTTGCAGATGAAGCTCTTTCCACTTACTTGCTGGAACATCCACCAGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTGCTGGAGAAGCACAGAGCTCTTCACACTTCCTTGTTGATTCTTGTTCTTCTAGGTACTTGTATGGTGATTGGAGACGGGCTTCTCACTCCTGCCATTTCTGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCAAGGCTCACCATGAGTATGCAGTGGTTCCAATCACTTGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTACGGCACACATCGAGTTGGTTTTGTATTTGCCCCCATTGTATTGGCATGGCTACTCTGCATCAGCACCCTTGGCATATACAATATTATACACTGGAATCCACGTGTTTATCAGGCTCTTTCTCCATATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGGGGTATATTGTTGTGTATAACAGGCTCGGAAGCGATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACTTTCCTGGTGTATCCAGCGCTTATATTGGCATACATGGGCCAAGCTGCTTACTTATCACAACATCACCATACCACCAAAAACATTGGCTTCTACGTTTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTACAATTGCTATACTTGCGTCGGTTGTGGGAAGCCAAGCAATCATCAGCGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAGGGTGAAGGTTGTTCATACTTCTGATAAGATCCATGGCCAGATATACATTCCAGAGATAAATTGGATTCTTATGATTCTCTGTGTCGCCGTTACCATTGGATTTAGGGACATAAAACACCTCGGAAATGCTTCAGGTCTGGCTGTAATGACTGTGATGCTTGTGACAACCTGTCTTACATCTTTGGTGATTGTCCTGTGTTGGAACAAATCTCCACTCTTGGCCCTCTCCTTTTTGATTTTCTTTGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTTTTAGCTCTCTTCCTCATGACCATCATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATTTGATCTTCACAACAAGGTTTCATTAGAATGGTTACTAGCATTGGGGCCAAGCCTTGGGATTGCACGTGTCCCCGGCATTGGATTAGTCTTCACTGATCTCACTTCTGGCATCCCTGCCAACTTCTCTCGGTTTGTCACCAACCTCCCGGCATTTCATCGGATTCTTGTCTTTGTATGCATAAAGTCAGTACCAGTTCCTTTCGTACCTCCAGCTGAGCGATATCTCGTGGGAAGAGTTGGCCCAGCTACGCATCGATCGTACAGGTGCATTGTTCGGTATGGCTACCGTGATGTTCACCAGGACGTGGACTCATTTGAGTCTGAATTAGTCACGAAACTTGCAGACTTCATCCGCTATGATTGGTTCAGAAAGCAAAGAGGCAACTCTTGCAGTGAGGATGATGCATCCCGTTCAAATGAATCGACAAGTGAGTGCAAGCTGGCTGTGATTGGAACCATAGCATTTGCAGGTGCAACTGCCTATGAAGAGACTGTGCAGCCTGCAAGCGTATCAGTTGGGTTCCAAACTGTTGACAGCATCGGTGATGTGATTGAAATGGAGCCACCGGGAGAAGAAAGAAGAGTCAGGTTTGCCATAGATGACGAATTTGAATGTGGCTCACGAGCTGAAACAGAAGCCCTTCTGCAAGAAGAACTAGAAGATCTTGTAGCTGCCCAGCAATCAGGGACAGCGTTCATTCTCGGGCATTCACACGTCCGGGCAAAGCAAGGATCGTCTCTGTTGAAGAGACTGGCCATTAACTATGGCTACAACTTCCTAAGAAGGAATTGCAGAGGAGCAGATGTTGCTCTTAAGGTGCCACCAGTTTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAA 2562 44.73 MDVFNIHFQNTLSSIEEQPRRNFGHHCSSPCVCLCAFFSSLKNKGQTGNTDEGFSLGDRDKDAMDLEHGKCWDSSKKDSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSDTNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHRALHTSLLILVLLGTCMVIGDGLLTPAISVFSAVSGLELSMSKAHHEYAVVPITCFILVCLFALQHYGTHRVGFVFAPIVLAWLLCISTLGIYNIIHWNPRVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHHTTKNIGFYVSVPESVRWPVLTIAILASVVGSQAIISGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWILMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKSPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEFDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPATHRSYRCIVRYGYRDVHQDVDSFESELVTKLADFIRYDWFRKQRGNSCSEDDASRSNESTSECKLAVIGTIAFAGATAYEETVQPASVSVGFQTVDSIGDVIEMEPPGEERRVRFAIDDEFECGSRAETEALLQEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 853
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6602402 6609680 - CmPI595203_07g005510.1 Cmu07g0551 420102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0551 853 Coils Coil 774 794 - -
Cmu07g0551 853 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 73 852 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu07g0551 853 Pfam K+ potassium transporter C-terminal domain 590 851 IPR053952 -
Cmu07g0551 853 NCBIfam potassium uptake protein 86 852 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu07g0551 853 Pfam K+ potassium transporter integral membrane domain 86 578 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0551 Cmu-Chr7:6602402 Cmu09g1813 Cmu-Chr9:34286718 3.00E-283 dispersed
Cmu07g0551 Cmu-Chr7:6602402 Cmu10g2199 Cmu-Chr10:28068846 9.60E-290 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0551 K03549 - csv:101211022 1508.81