Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0562 ATGGAACTCCCCAATTCCACTAATCAAATGGCTTCCTCTTCCAACCCCACCACCCCATTTCGCGGTTCCTTCCACCGTCGAGCCCATTCCGAGGTCCATTTCCGGATTCCCGATGATCTCGATCTTGTCTCCGACCCTTTCGACGCCCCTTCTTCTGGATTTGGAGATCTGGGCTTCGAGGATGATCTCTTGTGCACTTTCATGGACATCGAGAAGATCGGATCCAAAATCGACAATGGGTCTTCGTCGAATCCTGAAGTGGCTGGCGGCGGTACTGCGGCGGAGAATGTTGAAGGGGAGAAAATCTCCCGCCCCAGGCACCGTCATAGCAATTCTGCTGATGGGTCTTCTATTATGGAGTCTATTGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCTGAGTTGTGGACAATTGATCCTAAACGTGCCAAAAGGATTTTGGCAAATAGACAGTCTGCTGCTCGGTCAAAAGAGAGAAAAGCTCGCTACATAATGGAACTTGAGAGAAAAGTTCAAAGCCTTCAGACCGAAGCGACAACACTCTCTGCACAGCTCACGTTGTACCAGAGAGATACCACGGGGCTTTCAACAGAAAACTCAGAGCTCAAACTTCGTTTACAAGCTATGGAACAGCAAGCTCATCTTCGCGATGCTCTAAATGAAGCTTTGAAAAAGGAAGTCGAGCGGCTCAAGATCGCAACTGGAGAAGTAATGACAGCTACAGATTCGTATAACTTTGGAATGTCGCAAGTTTCATATCCCCAATCTTGCTTCTCACACCAACCACAACCTGAGCGACACAACCCACAGAGGACGACGCAAGGGCCCCAAGTTCATCCATTCCATTCTAGTTTACCAAACCCACATCAGTCTTTGTTTGTTGCATCGCACCAGCCTCACGCCTTGACAGAAATGTTTCATCAAGATCCTATTAGCCGATTGCAGGGTCTCGACATCAGTAGCAGAGGCACAGAAATAAAGCCAGAAGGCTCCTCTATATCCGTCAGTGAAAGTAGCAGCACATTTTGA 1032 48.45 MELPNSTNQMASSSNPTTPFRGSFHRRAHSEVHFRIPDDLDLVSDPFDAPSSGFGDLGFEDDLLCTFMDIEKIGSKIDNGSSSNPEVAGGGTAAENVEGEKISRPRHRHSNSADGSSIMESIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIMELERKVQSLQTEATTLSAQLTLYQRDTTGLSTENSELKLRLQAMEQQAHLRDALNEALKKEVERLKIATGEVMTATDSYNFGMSQVSYPQSCFSHQPQPERHNPQRTTQGPQVHPFHSSLPNPHQSLFVASHQPHALTEMFHQDPISRLQGLDISSRGTEIKPEGSSISVSESSSTF 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6859893 6865531 - CmPI595203_07g005620.1 Cmu07g0562 420113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0562 343 MobiDBLite consensus disorder prediction 1 21 - -
Cmu07g0562 343 Coils Coil 158 185 - -
Cmu07g0562 343 SUPERFAMILY Leucine zipper domain 142 193 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0562 343 MobiDBLite consensus disorder prediction 99 113 - -
Cmu07g0562 343 MobiDBLite consensus disorder prediction 256 279 - -
Cmu07g0562 343 Pfam bZIP transcription factor 142 196 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0562 343 FunFam probable transcription factor PosF21 141 194 - -
Cmu07g0562 343 Gene3D - 141 192 - -
Cmu07g0562 343 Coils Coil 217 237 - -
Cmu07g0562 343 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 11 289 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cmu07g0562 343 CDD bZIP_plant_RF2 143 192 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0562 343 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 140 203 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0562 343 MobiDBLite consensus disorder prediction 78 115 - -
Cmu07g0562 343 SMART brlzneu 138 202 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu07g0562 343 MobiDBLite consensus disorder prediction 1 23 - -
Cmu07g0562 343 MobiDBLite consensus disorder prediction 319 343 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1901 Cmu-Chr2:32933899 Cmu07g0562 Cmu-Chr7:6859893 7.20E-75 dispersed
Cmu05g0799 Cmu-Chr5:7085110 Cmu07g0562 Cmu-Chr7:6859893 3.00E-50 dispersed
Cmu05g0802 Cmu-Chr5:7118877 Cmu07g0562 Cmu-Chr7:6859893 2.20E-50 dispersed
Cmu07g0562 Cmu-Chr7:6859893 Cmu08g0640 Cmu-Chr8:18607063 9.20E-50 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6501 PF00170 bZIP_1 1.80E-08 CL0018 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0562 - - - 0.0