Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0568 ATGCGAGCATTGTTGAAGATGAAACGGCTGATTGAGCTCATCTTCTTGTTCGTTTTGACTCCACTTTGTGCTCGATGTGTAAACCTATCTTTAAACGACGACGTTTTGGGCCTGATAGTGTTTAAAGCTGCTGTTCAAGATCCGAAGCTGAAGCTCGCGAGCTGGAACGAAGATGACGATAGTCCCTGCAATTGGACTGGTGTTCAATGCAGCCCCAGATCCAACCGGGTCATCGAGCTCAACCTCGATGGGTTTTCTCTCTCGGGTCGGCTCGGCCGCGGACTTTTCCAGTTGGAGTTTCTGCAGAGATTGTCGCTCTCGAAGAACAATCTTAGTGGGAATATAAGCCCTAATTTCGCTCGAGTCGACAATCTTCAGGTGATTGATTTGAGTGGGAATAATTTCTCTGGTACTGTTCCGGATGATTTTTTTCGTCAATGTAGGTCATTGAGAGTCATCTCTTTGGCCAACAACAAATTTTCTGGGGAAATTCCTGATAGTTTGAGCTTGTGCGGGAGTCTTATTGCAGTTAACTTTTCCTCAAATCAGTTTTCGGGTTCTTTGCCTTCTGGGATTTGGTCTTTCAGTGGACTTCGATCTTTGGACTTGTCTGATAATGCTCTAGTGGGTGAAATTCCGAAAGTAAGTGAGAAGTTGTATAATCTGCGGACTCTTAACTTGAGCAAGAATCGGTTTTCTGGACAGATTCCTGATGGTATTGGGAGCTGTTTGCTTCTGAGGTCCATTGATCTTAGCGATAATTCATTCTCTGGGACTCTTCCTCAGACCATGCAGAAACTTGTTTTGTGTGTTGATCTGATTTTAAGCAGGAATTTGTTTGAAGGAGATGTTCCAGAGTGGATAGGAGAAATGAAAAACCTTGAAACTCTGGACTTTTCAGGGAACAATTTTACTGGCCGTATACCAACTACAATGGAGAATCTTCAATATCTAAAAGTATTAAATCTCTCTTCAAATGGCTTTACTGATAGCTTTCCAGAATCTGTGTTGAAGTGCCAAAGCCTTTTGGCATTAGATTTCAGCCATAACTTGATCACGGGTAATCTTCCCGCGATCGGAAGTTTAGGCAAGCTGCAGTTTCTGAACCTGTCTGGGAATTCTTTTGTTGGTCCTATTCCAGAAACTATTGGAGATTTGAAAGCTTTAAGCATTCTTGACTTGAGTGGAAATCAGCTGAATGAAACCATTCCTGATGCAATTGGAGGAGCTGTGTCCCTAATTGAGCTGAAGCTGGATGGAAATTTTCTAGGCGGTGAAATTCCCTCTTCAATTGGTCACTGTTCTTCCCTTTCAGCTCTGTTCATATCACACAATAACTTAACTGGTCCGATACCAGCAGCACTATCTAAACTCTCTTATCTTCAAAATGTCGATTTATCTTTCAACAATCTCAATGGAACCCTTCCGAAGCAGTTGTCTAATCTTCCAAACCTTCTTGTGTTCAATATATCTCACAACAACCTCAACGGTGAGCTGCCTGGTGGTGGATTCTTTAACACCATCTCCCCTTCATCTGTTGCTAGCAATCCATCCCTTTGTGGCGCTGTTGTTAATAAGTCTTGCCCTTCTGTCCTTCCAAAACCTATCGTTCTTAATCCCAACTCCACTTCAGATTCCATTTCCAGCTCACTGCCTCCAAGTAATAATCACAGAAGAAATAGAAATATCCTCAGCATTTCTGCGCTGGTTGCCATTGGTGCCGCGGCTTTCATAATCATTGGTGTTATATCGATCACCATCCTGAACCTTCGCGTTCAATCACCCACATCTTCTTTGTCCGCAGCTGCACTCGCATTATCTGTAGGGGATGATTTCAGTAATTCCTCCAGTCCTGATGCGAATTCTGGAAAGCTTGTGGTGTTATCAGGAGAACTTGACTTTAGCACAGGAGCACATGCCCTGCTGAACAAGGATTGTGAACTTGGGCGTGGTGGATTTGGAGCAGTTTACCATACTATTCTGCGGGACGGACACTCCGTTGCAATCAAGAAGCTTACAGTTTCTAGCCTTGTCAAGTCCCAAGAGGATTTCGAGAGGGAAGTTAGGAAGTTCGGGATTGTCAGGCACCAAAATCTCGTTGCACTCGAAGGTTATTATTGGACTCCCTCACTACAGCTCCTTATTTACGAATTTGTCCCCGGAGGTAGCTTGTATAGGTTGCTCCATGAAGCATCAGATGACAGTGTTCTTTCATGGAATGAGAGATTCGACATAATTCTTGGGACAGCAAAAGGTCTTGCTCACTTACATCAATCAAACACAATCCACTATAACATAAAATCCAGCAACATTCTTATTGATTGTAATGGTCAACCGAAGGTGGGAGATTATGGGCTAGCTAGATTACTGCCAATGTTAGACCGTTATGTTTTAAGTAGCAAGATCCAGAGCGCACTTGGTTACATGGCACCAGAGTTTGCTTGCAGGACGGTAAAGATAACCGAAAAATGCGATGTATATGGTTTTGGGATATTGATTCTAGAGGTGGTTACGGGGAAGAGACCTGTCGAGTACATGGAAGATGACGTTGCAGTCCTCTGTGACATGGTCCGAGAAGCAGTGGAAGAAGGAAGAGCGGAAGAATGCATTGACAGGAAACTGAGGGGGTATTTCCCTGTTGAAGAGGCTGTTCCCGTGTTAAAATTAGGGTTGATATGCACCTCCCATGTGCCATCAAACCGACCCGACATGAGAGAAATGGTCAAGATATTGGAGATGATCAAATGCCCAGCTGAATTACAAGAGGAATTGGGATAA 2778 43.66 MRALLKMKRLIELIFLFVLTPLCARCVNLSLNDDVLGLIVFKAAVQDPKLKLASWNEDDDSPCNWTGVQCSPRSNRVIELNLDGFSLSGRLGRGLFQLEFLQRLSLSKNNLSGNISPNFARVDNLQVIDLSGNNFSGTVPDDFFRQCRSLRVISLANNKFSGEIPDSLSLCGSLIAVNFSSNQFSGSLPSGIWSFSGLRSLDLSDNALVGEIPKVSEKLYNLRTLNLSKNRFSGQIPDGIGSCLLLRSIDLSDNSFSGTLPQTMQKLVLCVDLILSRNLFEGDVPEWIGEMKNLETLDFSGNNFTGRIPTTMENLQYLKVLNLSSNGFTDSFPESVLKCQSLLALDFSHNLITGNLPAIGSLGKLQFLNLSGNSFVGPIPETIGDLKALSILDLSGNQLNETIPDAIGGAVSLIELKLDGNFLGGEIPSSIGHCSSLSALFISHNNLTGPIPAALSKLSYLQNVDLSFNNLNGTLPKQLSNLPNLLVFNISHNNLNGELPGGGFFNTISPSSVASNPSLCGAVVNKSCPSVLPKPIVLNPNSTSDSISSSLPPSNNHRRNRNILSISALVAIGAAAFIIIGVISITILNLRVQSPTSSLSAAALALSVGDDFSNSSSPDANSGKLVVLSGELDFSTGAHALLNKDCELGRGGFGAVYHTILRDGHSVAIKKLTVSSLVKSQEDFEREVRKFGIVRHQNLVALEGYYWTPSLQLLIYEFVPGGSLYRLLHEASDDSVLSWNERFDIILGTAKGLAHLHQSNTIHYNIKSSNILIDCNGQPKVGDYGLARLLPMLDRYVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILILEVVTGKRPVEYMEDDVAVLCDMVREAVEEGRAEECIDRKLRGYFPVEEAVPVLKLGLICTSHVPSNRPDMREMVKILEMIKCPAELQEELG 925
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 6975970 6979151 - CmPI595203_07g005680.1 Cmu07g0568 420119
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0568 925 SUPERFAMILY RNI-like 79 400 - -
Cmu07g0568 925 Gene3D Ribonuclease Inhibitor 32 313 IPR032675 -
Cmu07g0568 925 Pfam Protein tyrosine and serine/threonine kinase 644 910 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0568 925 SMART LRR_typ_2 386 410 IPR003591 -
Cmu07g0568 925 SMART LRR_typ_2 98 121 IPR003591 -
Cmu07g0568 925 SMART LRR_typ_2 291 315 IPR003591 -
Cmu07g0568 925 SMART LRR_typ_2 482 506 IPR003591 -
Cmu07g0568 925 SMART LRR_typ_2 122 146 IPR003591 -
Cmu07g0568 925 SMART LRR_typ_2 219 243 IPR003591 -
Cmu07g0568 925 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 32 310 - -
Cmu07g0568 925 Gene3D Ribonuclease Inhibitor 314 532 IPR032675 -
Cmu07g0568 925 PANTHER LEUCINE RICH REPEAT KINASE 2 392 915 IPR051420 -
Cmu07g0568 925 SUPERFAMILY Protein kinase-like (PK-like) 646 912 IPR011009 -
Cmu07g0568 925 Pfam Leucine rich repeat 197 255 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine rich repeat 317 374 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Cmu07g0568 925 Gene3D Transferase(Phosphotransferase) domain 1 719 923 - -
Cmu07g0568 925 Gene3D Phosphorylase Kinase; domain 1 631 718 - -
Cmu07g0568 925 ProSiteProfiles Protein kinase domain profile. 642 914 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0568 925 SUPERFAMILY L domain-like 362 516 - -
Cmu07g0568 925 CDD STKc_IRAK 648 912 - -
Cmu07g0568 925 ProSitePatterns Protein kinases ATP-binding region signature. 648 671 IPR017441 GO:0005524(InterPro)
Cmu07g0568 925 FunFam Leucine-rich repeat receptor-like protein kinase PXC2 357 531 - -
Cmu07g0568 925 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 636 718 - -
Cmu07g0568 925 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 719 920 - -
Cmu07g0568 925 Pfam Leucine Rich Repeat 461 482 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 436 458 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 149 169 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 412 434 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 389 409 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 124 143 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Cmu07g0568 925 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0568 Cmu-Chr7:6975970 Cmu10g2977 Cmu-Chr10:35966214 1.20E-165 dispersed
Cmu11g0570 Cmu-Chr11:6280047 Cmu07g0568 Cmu-Chr7:6975970 5.20E-199 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75652 PF07714 PK_Tyr_Ser-Thr 4.20E-40 CL0016 Cmu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0568 - - - 0.0