Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0570 ATGGAGGCTCCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA 468 39.53 MEAPSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 155
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7031110 7033193 + CmPI595203_07g005700.1 Cmu07g0570 420121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0570 155 Pfam Response regulator receiver domain 24 148 IPR001789 GO:0000160(InterPro)
Cmu07g0570 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 150 IPR045279 GO:0009736(InterPro)
Cmu07g0570 155 ProSiteProfiles Response regulatory domain profile. 23 154 IPR001789 GO:0000160(InterPro)
Cmu07g0570 155 SMART REC_2 22 150 IPR001789 GO:0000160(InterPro)
Cmu07g0570 155 MobiDBLite consensus disorder prediction 1 23 - -
Cmu07g0570 155 Gene3D - 18 155 - -
Cmu07g0570 155 SUPERFAMILY CheY-like 20 149 IPR011006 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0570 Cmu-Chr7:7031110 Cmu10g2355 Cmu-Chr10:29898023 1.80E-40 dispersed
Cmu07g0570 Cmu-Chr7:7031110 Cmu06g1714 Cmu-Chr6:28166954 1.90E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6502 PF00072 Response_reg 1.10E-21 CL0304 Cmu TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0570 K14492 - csv:101208898 248.44