Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g0570 | ATGGAGGCTCCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA | 468 | 39.53 | MEAPSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSKVNMIITDYCMPGMSGYELLKKIKRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN | 155 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7031110 | 7033193 | + | CmPI595203_07g005700.1 | Cmu07g0570 | 420121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g0570 | 155 | Pfam | Response regulator receiver domain | 24 | 148 | IPR001789 | GO:0000160(InterPro) | |
Cmu07g0570 | 155 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 18 | 150 | IPR045279 | GO:0009736(InterPro) | |
Cmu07g0570 | 155 | ProSiteProfiles | Response regulatory domain profile. | 23 | 154 | IPR001789 | GO:0000160(InterPro) | |
Cmu07g0570 | 155 | SMART | REC_2 | 22 | 150 | IPR001789 | GO:0000160(InterPro) | |
Cmu07g0570 | 155 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cmu07g0570 | 155 | Gene3D | - | 18 | 155 | - | - | |
Cmu07g0570 | 155 | SUPERFAMILY | CheY-like | 20 | 149 | IPR011006 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g0570 | Cmu-Chr7:7031110 | Cmu10g2355 | Cmu-Chr10:29898023 | 1.80E-40 | dispersed | |
Cmu07g0570 | Cmu-Chr7:7031110 | Cmu06g1714 | Cmu-Chr6:28166954 | 1.90E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6502 | PF00072 | Response_reg | 1.10E-21 | CL0304 | Cmu | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g0570 | K14492 | - | csv:101208898 | 248.44 |