Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0637 ATGACGAAGTCCAAGAGTTTTATACACAACCTCATCAGACCATTCAGATTCGGTTCCTCAAGAGATAGGCAGGGCGAGGATGATTTGGAGGAGATTGCTGCTAAGGAACAGAAGGTTATTCAGTTCGAAATCTTAGTTGAAGCTACCAATAATTTCCACCAGAATAACAAGCTTGGCCAAGGCGGATTTGGTCCAGTTTTCAAGGGGAAGTTAAAGGATGGAAGAGTTATTGCAGTTAAGAAGTTGTCGCATTATTCAAAACAAGGGAGAAAGGAGTTTATGACTGAAGCTAAATTGTTGGCTCGTGTGCAGCACAGAAATGTTGTCAATCTGTTGGGATACTGTGTGCATGGTTCAGAGAAACTACTGGTTTACGAATACGTCACGAATGAGAGCCTTGACAAGCTTCTATTTAAATCCAGCAGACGAGGAGAACTTGATTGGAAGAAAAGGTATGACATAATCTTTGGCATCGCACGAGGGTTGCAATATCTTCATGTCGACTCACATAATGTCATTATCCATCGTGACATAAAGGCTAGTAACATTCTGTTGGATGATAAATGGGTCCCTAAGATTGCAGATTTTGGCATGGCTCGCCTCTTCCCTGAAGATCAAACTCATGTCAATACTCGTGTTGCTGGTACAAACGGATATATGGCTCCCGAATATGTGATGCACGGACATCTATCAGCAAAGACAGATGTTTTTAGCTTTGGTGTTTTGGTTTTGGAACTTATAAGCGGCCAGCGAAATTCGTCATTTAGTTCATTTATGGATGCCGAGAATCTACTTGATTGGGCTTACAAGCTATACAAGAAGGGCAGGAGCTTGGAAATCATGGACCCAACATTAGCATCATCAGCTGTTCCTGACCAAGTTACAATGTGCATTCAGATAGGATTGCTCTGCACACAAGGCGATCCGCATCTACGGCCAGCCATGCCACGTGTAGTTTTAATCCTTTCGAAGAGACATGGTAATTTGGACGAACCAACAAGACCAGGAATACCCGGGTCTCGGTATAGAAGATCTCGTAGGACAAGTGCATCGTCCTCCAACGCTGGTACTTCGGGAACTTCTGGTGCATCCGACTCCTACGCTATGACGAGCAATACTACTGGAACTATAACTGCTACCGCAACGGCAACTGCAACAGCAAACGAACTTGCTTCTGGTTCTTCTCCAGTTAGTCGAGTATCTGCAACAGCAAATGAAGTTGCTTCTGGTTCTTCTTCAGTTAGTCAAGGATACGATACTCGTGGGAAACGTCCGATAGAAGGTTAG 1287 43.9 MTKSKSFIHNLIRPFRFGSSRDRQGEDDLEEIAAKEQKVIQFEILVEATNNFHQNNKLGQGGFGPVFKGKLKDGRVIAVKKLSHYSKQGRKEFMTEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVTNESLDKLLFKSSRRGELDWKKRYDIIFGIARGLQYLHVDSHNVIIHRDIKASNILLDDKWVPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKTDVFSFGVLVLELISGQRNSSFSSFMDAENLLDWAYKLYKKGRSLEIMDPTLASSAVPDQVTMCIQIGLLCTQGDPHLRPAMPRVVLILSKRHGNLDEPTRPGIPGSRYRRSRRTSASSSNAGTSGTSGASDSYAMTSNTTGTITATATATATANELASGSSPVSRVSATANEVASGSSSVSQGYDTRGKRPIEG 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9619270 9624290 + CmPI595203_07g006370.1 Cmu07g0637 420188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0637 428 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 358 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cmu07g0637 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0637 428 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Cmu07g0637 428 SMART serkin_6 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0637 428 Gene3D Phosphorylase Kinase; domain 1 17 127 - -
Cmu07g0637 428 MobiDBLite consensus disorder prediction 385 419 - -
Cmu07g0637 428 MobiDBLite consensus disorder prediction 344 368 - -
Cmu07g0637 428 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Cmu07g0637 428 Pfam Protein tyrosine and serine/threonine kinase 53 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g0637 428 SUPERFAMILY Protein kinase-like (PK-like) 38 340 IPR011009 -
Cmu07g0637 428 CDD STKc_IRAK 58 324 - -
Cmu07g0637 428 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Cmu07g0637 428 MobiDBLite consensus disorder prediction 327 368 - -
Cmu07g0637 428 MobiDBLite consensus disorder prediction 385 428 - -
Cmu07g0637 428 ProSiteProfiles Protein kinase domain profile. 52 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0637 Cmu-Chr7:9619270 Cmu10g1427 Cmu-Chr10:8419970 1.60E-80 dispersed
Cmu07g0637 Cmu-Chr7:9619270 Cmu01g2189 Cmu-Chr1:34384853 2.60E-86 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75653 PF00069 Pkinase 2.70E-49 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0637 - - - 0.0