Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0642 ATGAACAATCGGGCTGGACTCCTTCGAATTCGCCTGCTTCGAGGCCACAATCTCGCCATTCGCGATGCTCCAACTCGTAGCAGCGATCCCTACGTCGTCATCTCCTGCGCTAACCAGAAATTCAAATCTCGCGTGGTGAAGAAAAACTGCAATCCAGAATGGAACGAGGAATTCACATTTTCGATTACAGATGTCAACACGGCAATCAAATTGGCAGTGTTCGACAAAGATAGATTCACAAAGGACGATGGAATGGGGGATGCGGAGATCGACATAAAACCGTACATAGAGTGTTTGAATATGGGGTTAGAGAATCTGCCAAATGGTTGTGTGGTGAAAAGGGTTCAACCAAGCAGATCAAACAGCCTTGCAGATGAGAGTTCTTGTGTTTGGAACGATGGTAAGATCATCCAAGACATGACTCTCAGATTGCAGAATGTTGAATGTGGTGAAATCATGATTCAGCTTCAGATGTTCAATGTTTCGATTTTCAAAGGCCTAAGAACCTACTCTTTAGCCTGA 522 44.64 MNNRAGLLRIRLLRGHNLAIRDAPTRSSDPYVVISCANQKFKSRVVKKNCNPEWNEEFTFSITDVNTAIKLAVFDKDRFTKDDGMGDAEIDIKPYIECLNMGLENLPNGCVVKRVQPSRSNSLADESSCVWNDGKIIQDMTLRLQNVECGEIMIQLQMFNVSIFKGLRTYSLA 173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9786660 9787944 - CmPI595203_07g006420.1 Cmu07g0642 420193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0642 173 CDD C2_ArfGAP 6 150 - -
Cmu07g0642 173 SMART C2_3c 7 104 IPR000008 -
Cmu07g0642 173 Pfam C2 domain 6 94 IPR000008 -
Cmu07g0642 173 PRINTS C2 domain signature 48 61 IPR000008 -
Cmu07g0642 173 PRINTS C2 domain signature 24 36 IPR000008 -
Cmu07g0642 173 PRINTS C2 domain signature 69 77 IPR000008 -
Cmu07g0642 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 161 IPR035892 -
Cmu07g0642 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 162 IPR044562 -
Cmu07g0642 173 Gene3D C2 domain 2 165 IPR035892 -
Cmu07g0642 173 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0605 Cmu-Chr1:6610995 Cmu07g0642 Cmu-Chr7:9786660 7.20E-59 dispersed
Cmu05g1214 Cmu-Chr5:12500559 Cmu07g0642 Cmu-Chr7:9786660 7.80E-47 dispersed
Cmu07g0642 Cmu-Chr7:9786660 Cmu06g1488 Cmu-Chr6:26154725 1.80E-49 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0642 - - - 0.0