Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g0682 | ATGCTCCAAAGCTCCGTTTTGTCTTTCATTTCGATTCCCACTTCTTTTCGCTTTGAAAACCATCAAGGCATCAACGCACGCCTCTGTGGACCCCTTCACAAGAATATGATTGAAAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTAATAGGTAGAGGGAGCTATGGAGTTGTTGCATCTGCCATAGACACTCATTCTGGTGAGAAAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCTGATGCCACACGGATTCTAAGAGAAGTTAAGCTCCTTAGGTTTCTTCGTCATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGAAGGGATTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTCAAGACTAATGATGATCTCACTCCTCAGCATCATCAGTTTTTCTTGTATCAACTTCTTAGAGCCTTGAAATATATACATTCAGCGCATGTGTTCCATAGAGATCTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGACTTGCACGTGCATCTTTTAGTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATTTTTGCTGAAATGTTGGCAAGCAAGCCTTTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACCTACTTGGTACTCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGGTATTTGAGTGGCATGAGAAAAAAGAATCCAATACCTCTGTCTAGAAAGTTCCCGAATGCAGATCCACTAGCTCTTCGTTTACTTGAACGCCTGCTTGCATTTGATCCTGAGGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCTTATTTCCATGGACTGGCAAATCTGAAGGATGAACCATCTAGGCAACCCATTTCAAAACTCGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGACGTCAGAGAGCTTATCTATAGAGAAATTTTAGAGTATCACCCTCAAATGCTACAGGAATACCTTCAAGGTTCTGGGAGTCACTTTGTGTATCCCAGTGGAATTGATCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCAGTTCTAAGGAAGTATGCCTCCTTGCCTAGGGAGCGAATTTATATGCCAATAAATGAAGATGATGACGAAAAACGTAAAACAGAACAACAAAATGCAGCTTCAGCTGAACATGTAGCTCTTCAAAGCCCTCCTGGACCTGCTTATTCATTAACCGCTCGGAACGGTTCTGTTCAATGGTTGCACGGAAGGAAAGAATACAACATTGCTAGCCTTCCTCAGATTCTTAATTTGTAA | 1521 | 40.89 | MLQSSVLSFISIPTSFRFENHQGINARLCGPLHKNMIEKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREVKLLRFLRHPDIVDIKHIMLPPSRRDFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKNPIPLSRKFPNADPLALRLLERLLAFDPEDRPSAEEALADPYFHGLANLKDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSGSHFVYPSGIDRFKRQFDHLEERSGKGERGSPVLRKYASLPRERIYMPINEDDDEKRKTEQQNAASAEHVALQSPPGPAYSLTARNGSVQWLHGRKEYNIASLPQILNL | 506 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 12136067 | 12141809 | + | CmPI595203_07g006820.1 | Cmu07g0682 | 420233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g0682 | 506 | FunFam | Mitogen-activated protein kinase | 137 | 365 | - | - | |
Cmu07g0682 | 506 | SMART | serkin_6 | 51 | 342 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu07g0682 | 506 | ProSiteProfiles | Protein kinase domain profile. | 51 | 342 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu07g0682 | 506 | Gene3D | Transferase(Phosphotransferase) domain 1 | 137 | 365 | - | - | |
Cmu07g0682 | 506 | FunFam | Mitogen-activated protein kinase | 38 | 143 | - | - | |
Cmu07g0682 | 506 | MobiDBLite | consensus disorder prediction | 444 | 460 | - | - | |
Cmu07g0682 | 506 | MobiDBLite | consensus disorder prediction | 444 | 475 | - | - | |
Cmu07g0682 | 506 | Pfam | Protein kinase domain | 51 | 342 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu07g0682 | 506 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 48 | 383 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Cmu07g0682 | 506 | SUPERFAMILY | Protein kinase-like (PK-like) | 48 | 347 | IPR011009 | - | |
Cmu07g0682 | 506 | ProSitePatterns | Protein kinases ATP-binding region signature. | 57 | 81 | IPR017441 | GO:0005524(InterPro) | |
Cmu07g0682 | 506 | CDD | STKc_TDY_MAPK | 50 | 387 | - | - | |
Cmu07g0682 | 506 | FunFam | Mitogen-activated protein kinase | 366 | 388 | - | - | |
Cmu07g0682 | 506 | Gene3D | Phosphorylase Kinase; domain 1 | 67 | 388 | - | - | |
Cmu07g0682 | 506 | ProSitePatterns | MAP kinase signature. | 86 | 189 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g1561 | Cmu-Chr3:15086623 | Cmu07g0682 | Cmu-Chr7:12136067 | 2.40E-255 | dispersed | |
Cmu07g0682 | Cmu-Chr7:12136067 | Cmu09g2134 | Cmu-Chr9:37458842 | 7.20E-184 | dispersed | |
Cmu07g0682 | Cmu-Chr7:12136067 | Cmu06g1497 | Cmu-Chr6:26259740 | 3.20E-208 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75654 | PF00069 | Pkinase | 3.40E-67 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g0682 | - | - | - | 0.0 |