Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0682 ATGCTCCAAAGCTCCGTTTTGTCTTTCATTTCGATTCCCACTTCTTTTCGCTTTGAAAACCATCAAGGCATCAACGCACGCCTCTGTGGACCCCTTCACAAGAATATGATTGAAAAGGAATTTTTCACTGAATATGGTGAAGCTACTCAATATGAAATTGAAGAAGTAATAGGTAGAGGGAGCTATGGAGTTGTTGCATCTGCCATAGACACTCATTCTGGTGAGAAAGTTGCCATCAAGAAGATAAATAATGTCTTCGAGCATGTTTCTGATGCCACACGGATTCTAAGAGAAGTTAAGCTCCTTAGGTTTCTTCGTCATCCTGATATTGTTGATATAAAACATATAATGCTCCCTCCATCCAGAAGGGATTTCAAAGATTTGTACATTGTTTTTGAGTTGATGGAGTGTGATCTTCATCATGTACTCAAGACTAATGATGATCTCACTCCTCAGCATCATCAGTTTTTCTTGTATCAACTTCTTAGAGCCTTGAAATATATACATTCAGCGCATGTGTTCCATAGAGATCTGAAGCCGAAGAATATACTTGCCAATGCAGACTGCAAGCTGAAGATCTGTGACTTTGGACTTGCACGTGCATCTTTTAGTGATGCCCCATCTGCTATTTTTTGGACTGATTATGTGGCTACTCGATGGTACCGTGCTCCTGAACTCTGTGGTTCTTTTTTCTCAAAGTATACACCAGCTATTGATATTTGGAGCATAGGATGTATTTTTGCTGAAATGTTGGCAAGCAAGCCTTTGTTTCCTGGGAAAAGTGTTGTCCATGAGCTGGATCTAATAACTGACCTACTTGGTACTCCTTCAGCTGAATGTATTGCTAAGATTCGTAATGAAAAGGCTAAAAGGTATTTGAGTGGCATGAGAAAAAAGAATCCAATACCTCTGTCTAGAAAGTTCCCGAATGCAGATCCACTAGCTCTTCGTTTACTTGAACGCCTGCTTGCATTTGATCCTGAGGATCGTCCTTCTGCAGAGGAGGCATTAGCTGATCCTTATTTCCATGGACTGGCAAATCTGAAGGATGAACCATCTAGGCAACCCATTTCAAAACTCGAGTTTGAGTTTGAAAGGAGAAAGTTGACCAAAGATGACGTCAGAGAGCTTATCTATAGAGAAATTTTAGAGTATCACCCTCAAATGCTACAGGAATACCTTCAAGGTTCTGGGAGTCACTTTGTGTATCCCAGTGGAATTGATCGATTCAAGCGACAATTTGATCATCTTGAGGAACGTTCTGGTAAAGGTGAGAGAGGCAGTCCAGTTCTAAGGAAGTATGCCTCCTTGCCTAGGGAGCGAATTTATATGCCAATAAATGAAGATGATGACGAAAAACGTAAAACAGAACAACAAAATGCAGCTTCAGCTGAACATGTAGCTCTTCAAAGCCCTCCTGGACCTGCTTATTCATTAACCGCTCGGAACGGTTCTGTTCAATGGTTGCACGGAAGGAAAGAATACAACATTGCTAGCCTTCCTCAGATTCTTAATTTGTAA 1521 40.89 MLQSSVLSFISIPTSFRFENHQGINARLCGPLHKNMIEKEFFTEYGEATQYEIEEVIGRGSYGVVASAIDTHSGEKVAIKKINNVFEHVSDATRILREVKLLRFLRHPDIVDIKHIMLPPSRRDFKDLYIVFELMECDLHHVLKTNDDLTPQHHQFFLYQLLRALKYIHSAHVFHRDLKPKNILANADCKLKICDFGLARASFSDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLASKPLFPGKSVVHELDLITDLLGTPSAECIAKIRNEKAKRYLSGMRKKNPIPLSRKFPNADPLALRLLERLLAFDPEDRPSAEEALADPYFHGLANLKDEPSRQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLQGSGSHFVYPSGIDRFKRQFDHLEERSGKGERGSPVLRKYASLPRERIYMPINEDDDEKRKTEQQNAASAEHVALQSPPGPAYSLTARNGSVQWLHGRKEYNIASLPQILNL 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 12136067 12141809 + CmPI595203_07g006820.1 Cmu07g0682 420233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0682 506 FunFam Mitogen-activated protein kinase 137 365 - -
Cmu07g0682 506 SMART serkin_6 51 342 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0682 506 ProSiteProfiles Protein kinase domain profile. 51 342 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0682 506 Gene3D Transferase(Phosphotransferase) domain 1 137 365 - -
Cmu07g0682 506 FunFam Mitogen-activated protein kinase 38 143 - -
Cmu07g0682 506 MobiDBLite consensus disorder prediction 444 460 - -
Cmu07g0682 506 MobiDBLite consensus disorder prediction 444 475 - -
Cmu07g0682 506 Pfam Protein kinase domain 51 342 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g0682 506 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 48 383 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cmu07g0682 506 SUPERFAMILY Protein kinase-like (PK-like) 48 347 IPR011009 -
Cmu07g0682 506 ProSitePatterns Protein kinases ATP-binding region signature. 57 81 IPR017441 GO:0005524(InterPro)
Cmu07g0682 506 CDD STKc_TDY_MAPK 50 387 - -
Cmu07g0682 506 FunFam Mitogen-activated protein kinase 366 388 - -
Cmu07g0682 506 Gene3D Phosphorylase Kinase; domain 1 67 388 - -
Cmu07g0682 506 ProSitePatterns MAP kinase signature. 86 189 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1561 Cmu-Chr3:15086623 Cmu07g0682 Cmu-Chr7:12136067 2.40E-255 dispersed
Cmu07g0682 Cmu-Chr7:12136067 Cmu09g2134 Cmu-Chr9:37458842 7.20E-184 dispersed
Cmu07g0682 Cmu-Chr7:12136067 Cmu06g1497 Cmu-Chr6:26259740 3.20E-208 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75654 PF00069 Pkinase 3.40E-67 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0682 - - - 0.0