Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0787 ATGTCATCAAGTAATGAAGAGAACATTGTAGACATGAGTAACACTCCAACTAATAGCCAAGTTCGTGGTGTTACACGAGGAGTCGGATTACATCGTGTGATTGAGGCAAGTGGAGGACGAATACCTATCTCATGGGATCCTTTCCCGGGGAAACCAGTTGGGAAAGTTGCGAATCTTTTTAGCAGTGAGATTGAGATGGAGAAGGGAATTTGTGGAAGTGAGGATCAGGTTATTGCATCAATGGGAGATTATGATAATGTTGTGAATATTGGAGGAATAAAAGAGGGTGATATTGGTGGAGGGAAGAATAATTGTAATAAAGGGAAAATGGTGATGGGTAAAAGAAGAAGTGCAATGGCTCCAAGGATTGCTTTTCAGACAAGGAGTGCTGAGGATGTTCTTGATGATGGCTATAGATGGAGGAAATATGGTCAGAAGGCAGTCAAACATAGCAATCATCCTAGGAGCTATTATCGGTGTACACATCACACATGCAACGTTAAGAAACAAATTCAAAGGCACGCCAAGGATCCGACCATAGTGGTGACAACATATGAAGGGATTCACAACCATCCATCTGAGAAATTAATGGAGACTCTAAGCCCTCTTCTTAAGCAATTGCAGTTCCTTTCTGGCATTTAG 642 41.74 MSSSNEENIVDMSNTPTNSQVRGVTRGVGLHRVIEASGGRIPISWDPFPGKPVGKVANLFSSEIEMEKGICGSEDQVIASMGDYDNVVNIGGIKEGDIGGGKNNCNKGKMVMGKRRSAMAPRIAFQTRSAEDVLDDGYRWRKYGQKAVKHSNHPRSYYRCTHHTCNVKKQIQRHAKDPTIVVTTYEGIHNHPSEKLMETLSPLLKQLQFLSGI 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 19914567 19921316 - CmPI595203_07g007870.1 Cmu07g0787 420338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0787 213 FunFam WRKY transcription factor 57 120 194 - -
Cmu07g0787 213 Pfam WRKY DNA -binding domain 135 192 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu07g0787 213 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 192 IPR044810 GO:0003700(InterPro)
Cmu07g0787 213 MobiDBLite consensus disorder prediction 1 22 - -
Cmu07g0787 213 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu07g0787 213 Gene3D WRKY domain 119 193 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu07g0787 213 SMART WRKY_cls 134 193 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu07g0787 213 SUPERFAMILY WRKY DNA-binding domain 127 193 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0787 Cmu-Chr7:19914567 Cmu09g0478 Cmu-Chr9:4466641 4.10E-24 dispersed
Cmu07g0787 Cmu-Chr7:19914567 Cmu07g0788 Cmu-Chr7:20006302 2.10E-12 tandem
Cmu04g0691 Cmu-Chr4:21043254 Cmu07g0787 Cmu-Chr7:19914567 1.30E-19 transposed
Cmu05g1427 Cmu-Chr5:18865943 Cmu07g0787 Cmu-Chr7:19914567 1.20E-29 transposed
Cmu07g1525 Cmu-Chr7:30462554 Cmu07g0787 Cmu-Chr7:19914567 2.10E-30 transposed
Cmu09g1370 Cmu-Chr9:20863587 Cmu07g0787 Cmu-Chr7:19914567 2.50E-27 transposed
Cmu11g0779 Cmu-Chr11:8329010 Cmu07g0787 Cmu-Chr7:19914567 3.30E-26 transposed
Cmu05g0140 Cmu-Chr5:1229727 Cmu07g0787 Cmu-Chr7:19914567 9.40E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6511 PF03106 WRKY 1.10E-24 CL0274 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0787 - - - 0.0