Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g0816 | ATGGATGACTTTGGTTCATCTTCTAGATTTCATCATCATCAGTACTACAACTTTGAAAGCAGCAGCAGCAGCAACAACAACAATAACAACAGAAGAAGCAGAGATTTTGATGATGATGAACAACAACAACAACAAGATCAAGAAATGGAAGAATGTGGTAACAACAACAACGACAACAACAACAATAATAATTGTTGTGTTTTTGTAGAGAAAGAGCACATGTTTGACAAGGTTGTAACTCCAAGCGATGTGGGAAAATTAAACCGTTTAGTTATCCCAAAACAACACGCTGAAAAATACTTCCCACTTGATGCTTCATCCAACGAAAAAGGTCTTCTCTTAAACTTTGAAGACCGCTGTGGTAAGCTTTGGCGCTTCCGTTACTCTTACTGGACCAGCAGCCAAAGCTATGTGATGACCAAAGGCTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTCTCTTTTCAAAGACCTCTACATCATGCTAAAGATCGTTTTTTTATAGATTGGCGACGCCGTCCACCGCATCCCACCGTCGACATGCCTTTTCCTTTCAACCGCGGTGGCCAATTTCCTCCTCATCACCATTTTCAGCTTCACGGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGTCCTCCACTTGCCGCACAATAATAATGTCAGTTTATTTCATAATACCTATAATCATCATCATCATAATCATAATCGTCATCCTGTTCTTGACGGCTCGTCCTACGGTGGGGCATCGGCTTTTTACCATTTGAGATCCCCCTCCACAGCGCCGCAGATAGGGGCAGTGCCGGTTGTAGCAGATGGAAAGGGTGGTGGTAGCAGTGGTGGTGGTGGGAAAACGGCTGCGGCTAAGACGACATTGAGGCTTTTTGGTGTCAACATGGAATGTGCAGTATCTGAAGAGTCTGGTGATGATGAGTGTGACATAGGAACAACTTCGACGACGACAATGTTGTCGTCGTCTCAATTTCATGTTTATAATGGGATGCCGATGCCGATGCCGATGCTGATGCCGATGTCGATGCAGATGCCAATAAATAATAACAACGTATCAACCATGGAGTTCTTCGAGAAAGGGAAGTCATCGATGTCGTCGTCCTTTGATTTTGATACTTGA | 1167 | 44.04 | MDDFGSSSRFHHHQYYNFESSSSSNNNNNNRRSRDFDDDEQQQQQDQEMEECGNNNNDNNNNNNCCVFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDASSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHHAKDRFFIDWRRRPPHPTVDMPFPFNRGGQFPPHHHFQLHGQWNNNPVATPLSLHRDHVLHLPHNNNVSLFHNTYNHHHHNHNRHPVLDGSSYGGASAFYHLRSPSTAPQIGAVPVVADGKGGGSSGGGGKTAAAKTTLRLFGVNMECAVSEESGDDECDIGTTSTTTMLSSSQFHVYNGMPMPMPMLMPMSMQMPINNNNVSTMEFFEKGKSSMSSSFDFDT | 388 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 20749924 | 20751090 | - | CmPI595203_07g008160.1 | Cmu07g0816 | 420367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g0816 | 388 | MobiDBLite | consensus disorder prediction | 15 | 30 | - | - | |
Cmu07g0816 | 388 | ProSiteProfiles | B3 DNA-binding domain profile. | 75 | 179 | IPR003340 | GO:0003677(InterPro) | |
Cmu07g0816 | 388 | Pfam | B3 DNA binding domain | 75 | 178 | IPR003340 | GO:0003677(InterPro) | |
Cmu07g0816 | 388 | CDD | B3_DNA | 73 | 162 | IPR003340 | GO:0003677(InterPro) | |
Cmu07g0816 | 388 | MobiDBLite | consensus disorder prediction | 15 | 56 | - | - | |
Cmu07g0816 | 388 | SMART | B3_2 | 75 | 179 | IPR003340 | GO:0003677(InterPro) | |
Cmu07g0816 | 388 | SUPERFAMILY | DNA-binding pseudobarrel domain | 72 | 177 | IPR015300 | - | |
Cmu07g0816 | 388 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 22 | 311 | IPR044800 | GO:0003700(InterPro) | |
Cmu07g0816 | 388 | FunFam | B3 domain-containing protein | 68 | 187 | - | - | |
Cmu07g0816 | 388 | Gene3D | - | 68 | 183 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu06g0229 | Cmu-Chr6:2517799 | Cmu07g0816 | Cmu-Chr7:20749924 | 1.70E-51 | dispersed | |
Cmu07g0816 | Cmu-Chr7:20749924 | Cmu08g0698 | Cmu-Chr8:19268658 | 2.30E-09 | dispersed | |
Cmu10g2596 | Cmu-Chr10:32767911 | Cmu07g0816 | Cmu-Chr7:20749924 | 1.10E-38 | transposed | |
Cmu01g0125 | Cmu-Chr1:1137977 | Cmu07g0816 | Cmu-Chr7:20749924 | 3.90E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6514 | PF02362 | B3 | 1.40E-27 | CL0405 | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g0816 | K09287 | - | csv:101220139 | 508.449 |