Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0816 ATGGATGACTTTGGTTCATCTTCTAGATTTCATCATCATCAGTACTACAACTTTGAAAGCAGCAGCAGCAGCAACAACAACAATAACAACAGAAGAAGCAGAGATTTTGATGATGATGAACAACAACAACAACAAGATCAAGAAATGGAAGAATGTGGTAACAACAACAACGACAACAACAACAATAATAATTGTTGTGTTTTTGTAGAGAAAGAGCACATGTTTGACAAGGTTGTAACTCCAAGCGATGTGGGAAAATTAAACCGTTTAGTTATCCCAAAACAACACGCTGAAAAATACTTCCCACTTGATGCTTCATCCAACGAAAAAGGTCTTCTCTTAAACTTTGAAGACCGCTGTGGTAAGCTTTGGCGCTTCCGTTACTCTTACTGGACCAGCAGCCAAAGCTATGTGATGACCAAAGGCTGGAGCCGCTTTGTCAAAGACAAAAGACTCGATGCTGGTGATATTGTCTCTTTTCAAAGACCTCTACATCATGCTAAAGATCGTTTTTTTATAGATTGGCGACGCCGTCCACCGCATCCCACCGTCGACATGCCTTTTCCTTTCAACCGCGGTGGCCAATTTCCTCCTCATCACCATTTTCAGCTTCACGGCCAGTGGAATAATAATCCAGTGGCCACACCCTTATCTTTACACAGGGACCACGTCCTCCACTTGCCGCACAATAATAATGTCAGTTTATTTCATAATACCTATAATCATCATCATCATAATCATAATCGTCATCCTGTTCTTGACGGCTCGTCCTACGGTGGGGCATCGGCTTTTTACCATTTGAGATCCCCCTCCACAGCGCCGCAGATAGGGGCAGTGCCGGTTGTAGCAGATGGAAAGGGTGGTGGTAGCAGTGGTGGTGGTGGGAAAACGGCTGCGGCTAAGACGACATTGAGGCTTTTTGGTGTCAACATGGAATGTGCAGTATCTGAAGAGTCTGGTGATGATGAGTGTGACATAGGAACAACTTCGACGACGACAATGTTGTCGTCGTCTCAATTTCATGTTTATAATGGGATGCCGATGCCGATGCCGATGCTGATGCCGATGTCGATGCAGATGCCAATAAATAATAACAACGTATCAACCATGGAGTTCTTCGAGAAAGGGAAGTCATCGATGTCGTCGTCCTTTGATTTTGATACTTGA 1167 44.04 MDDFGSSSRFHHHQYYNFESSSSSNNNNNNRRSRDFDDDEQQQQQDQEMEECGNNNNDNNNNNNCCVFVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDASSNEKGLLLNFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQRPLHHAKDRFFIDWRRRPPHPTVDMPFPFNRGGQFPPHHHFQLHGQWNNNPVATPLSLHRDHVLHLPHNNNVSLFHNTYNHHHHNHNRHPVLDGSSYGGASAFYHLRSPSTAPQIGAVPVVADGKGGGSSGGGGKTAAAKTTLRLFGVNMECAVSEESGDDECDIGTTSTTTMLSSSQFHVYNGMPMPMPMLMPMSMQMPINNNNVSTMEFFEKGKSSMSSSFDFDT 388
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20749924 20751090 - CmPI595203_07g008160.1 Cmu07g0816 420367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0816 388 MobiDBLite consensus disorder prediction 15 30 - -
Cmu07g0816 388 ProSiteProfiles B3 DNA-binding domain profile. 75 179 IPR003340 GO:0003677(InterPro)
Cmu07g0816 388 Pfam B3 DNA binding domain 75 178 IPR003340 GO:0003677(InterPro)
Cmu07g0816 388 CDD B3_DNA 73 162 IPR003340 GO:0003677(InterPro)
Cmu07g0816 388 MobiDBLite consensus disorder prediction 15 56 - -
Cmu07g0816 388 SMART B3_2 75 179 IPR003340 GO:0003677(InterPro)
Cmu07g0816 388 SUPERFAMILY DNA-binding pseudobarrel domain 72 177 IPR015300 -
Cmu07g0816 388 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 22 311 IPR044800 GO:0003700(InterPro)
Cmu07g0816 388 FunFam B3 domain-containing protein 68 187 - -
Cmu07g0816 388 Gene3D - 68 183 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g0229 Cmu-Chr6:2517799 Cmu07g0816 Cmu-Chr7:20749924 1.70E-51 dispersed
Cmu07g0816 Cmu-Chr7:20749924 Cmu08g0698 Cmu-Chr8:19268658 2.30E-09 dispersed
Cmu10g2596 Cmu-Chr10:32767911 Cmu07g0816 Cmu-Chr7:20749924 1.10E-38 transposed
Cmu01g0125 Cmu-Chr1:1137977 Cmu07g0816 Cmu-Chr7:20749924 3.90E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6514 PF02362 B3 1.40E-27 CL0405 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0816 K09287 - csv:101220139 508.449