Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0917 ATGGCTTCTTCTTCTTCTTCTCCTAATTTCTCCTTCGGGATTTCTGCTTCTGCTTTCTCTGATCCTTTTCAGGTCGCCGGACCCCCCGATTCTGCCGACCCATCTTTTCATTTCTCTAATTTGGACCACCCTTCTGCTGCCTTTAGGTTTTTCCCTAATTTTGGCGATGCCACCGGTGGAGAGTTTGAATCTGATGAGTGGATGGATAGTTTAGTAGGCGGTGGAGATTCCACGTATAGCTCAAATTTGCCGTCTGCTTGCGATGCTTATGGTGAGTTTGGTCTCTATGGTACAGATCCCTTTAATGGCTCTCCCAGAAGACTCACTGTCGCTTGCTCTCCGCCATCTGAGTTGATCAACCGAGTTGTTCTCCCGGAAAGTTCATACAAAATGAATAGTGTTCCGCCACCATGGCCATCATCTCCACAGTTGGTTAAGGATGATGGACCAACCAATCCACCGGTGGAGAGGTCGGTGAAGAATGATGACGTTGTTGAAGGCTCGTCGAGTGCGGAAGAGGTTGAGTCATCGTCGCCGCTTCTGAAAGTCTTGCTCGATTGTGCGCGGCTCTGCGATTCTGAACCCAACCGAGCAGCGAAAGGTCTTAATCGGATTAGTAAATCGTTACGAGAAGATGGAGATCCGGCTGAACGAGTGGCGTTTTACTTCGGCGAGGCTCTTCGGAAGAGATTATCCTTGACGGTGATGAAGAATTGCTTGGATACAACTGAGAGTGATGCTAATTCTGAAGATTTCTTGCTCTCTTACAAAGCTCTGAACGACGCCTGTCCTTACTCCAAGTTCGCGCATCTAACGGCCAACCAAGCAATTCTGGAAGCTACAGAGAGAGCAAGTAAAATTCACATTGTCGACTTCGGAATCGTTCAAGGCGTTCAATGGGCGGCGCTTCTGCAGGCTTTGGCCACGCGAGCCACTGGAAAGCCTAGCAGAGTTCGTATCTCCGGAATACCAGCGCCGTCGCTTGGAGATTCACCGGCAGCGTCCCTATACGCCACTGGCAATAGACTCTCCGAGTTCGCAAAGCTTCTAGAACTGAATTTCGAGTTCGAACCGATTCTAACGCCGATTGAGAACCTGAACGAATCGAGCTTTAGCGTTCAATCAGACGAGGTATTGGCCGTGAATTTCATGCTTCAATTGTATAATCTCCTCGACGAGGATCCAGCTGGAGTTCATAATGCTCTTCGATTAGCAAAATCGTTGAGCCCTCAAATAGTGACTCTCGGCGAGTACGAGGCGGGTTTGAACCGGATCGGATTCTACAATCGCTTCAAGAACGCATTGAAATTCTACTCTGCCATTTTCGAATCGCTAGAGCCGAATTTGCCTCGAGACTCGCCAGAAAGACTCCAGTTAGAAAAACTGTTACTCGGCCGTCGAATCGCCGGCGTGGTTGGAACCGAAGAAGATTCAAGAAACAAAAGAAGAGTACGCATGGAAGACAAAGATCAATGGAAGAATTTGATGGAAAGCGCCGGATTCGAACCTGTAGCACTCAGCCATTACGCCATTAGTCAGGGGAAAATACTTTTATGGAACTACAATTACAGTTCTCTCTACACTCTGATCGAATCGGCACCGGAGTTTCTGTCGCTGGCATGGAACGAAGTTCCTCTCTTAACTGTATCTTCCTGGCGTTGA 1662 48.38 MASSSSSPNFSFGISASAFSDPFQVAGPPDSADPSFHFSNLDHPSAAFRFFPNFGDATGGEFESDEWMDSLVGGGDSTYSSNLPSACDAYGEFGLYGTDPFNGSPRRLTVACSPPSELINRVVLPESSYKMNSVPPPWPSSPQLVKDDGPTNPPVERSVKNDDVVEGSSSAEEVESSSPLLKVLLDCARLCDSEPNRAAKGLNRISKSLREDGDPAERVAFYFGEALRKRLSLTVMKNCLDTTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRATGKPSRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFEPILTPIENLNESSFSVQSDEVLAVNFMLQLYNLLDEDPAGVHNALRLAKSLSPQIVTLGEYEAGLNRIGFYNRFKNALKFYSAIFESLEPNLPRDSPERLQLEKLLLGRRIAGVVGTEEDSRNKRRVRMEDKDQWKNLMESAGFEPVALSHYAISQGKILLWNYNYSSLYTLIESAPEFLSLAWNEVPLLTVSSWR 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23286135 23287796 + CmPI595203_07g009170.1 Cmu07g0917 420468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0917 553 ProSiteProfiles GRAS family profile. 171 553 IPR005202 -
Cmu07g0917 553 MobiDBLite consensus disorder prediction 130 173 - -
Cmu07g0917 553 Pfam GRAS domain family 181 553 IPR005202 -
Cmu07g0917 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 173 552 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0917 Cmu-Chr7:23286135 Cmu11g0954 Cmu-Chr11:13186053 1.20E-54 dispersed
Cmu07g0917 Cmu-Chr7:23286135 Cmu01g1880 Cmu-Chr1:32360723 7.60E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6529 PF03514 GRAS 3.60E-108 CL0063 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0917 - - - 0.0