Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0944 ATGTCGGTCGCTAACGCCGACACATCTCTGACTATGTCGGACGTCTCGACAGTCGAGAAAAGCAGCCCGGCGGAGAGGGCTGAGTGGGTGGCAAACCCACCAGAGCCGCCAGGGATATGGCGAGAGGTAATCGAGTCTCTCCGTGACACCATGTTTCCCGATCCGAACAAGCTTTCGTCCCTGAAGAACAAGACCGGAACTGCGGTGGTTGGAAGCCTCTTGCAGGGTGTGTTCCCTATCCTCTGCTGGGGACAGAGCTACAATCTGGGGAAGTTCAAGAATGACATCTTGGCTGGTTTGACCCTGGCTAGCCTCTGCATTCCCCAGAGTATTGGATATGCAAATCTGGCTAAACTTGATCCTCAATATGGGCTGTATACAAGCATTGTGCCACCCCTGGTTTATGCAGTGTTGGGAAGTTCGAGGGAAATAGCAATCGGACCGGTGGCCATAGTATCTCTACTTTTGCCGTCAATGATTCAGAAAATTCAAGATCCCGCCGCCGACCCTCTTGCCTACAAAAACCTTGTGTTCACCGTCACTTTCTTCGCCGGAATCTTTCAGGCCGCCTTTGGACTCTTTCGGCTGGGGTTTTTGGTGGATTTTCTGTCACATGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCATCACTCACTTCACTAACAAAACTGATATTCTATCTGTTATGGAAGCTGTGTTTGGATCATTCCATCATCATAATGATCAATGGAATCCCTTCAACTTCATCATTGGCTCTTCATTCCTGTCCTTCATCCTCATCACCAAATTATTGGGGAAGAAGTACAAGAAAGTATTCTGGTTAGCTGCCATAGCTCCACTGTTGTGTGTAATCCTATCGACGCTTTTGGTGTTCCTCACAAGAGCCGACCGGCAGGGTGTGAAGATCGTCAAACGAGTCCCCGCCGGCCTGAACCCCATCTCGGCTCGCCACATCCAAATCCACTCCCCTCACTTCTCCCAAATCCTCAACGCCGCCTTCATCGTGGCCGTCATAGCCCTCACGGAGGCCATTGCTGTGGGGAGGTCACTGGCGTCCATGAAAGGTTACAACATTGATGGGAACAGAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCAGGCTCTCTCACTTCTTGCTACGCAGCAACAGGTTCTCTGTCACGGTCGGCGGTTAATTTCAGTGCCGGGTGCGAGACCGTGGTTTCGAACGTGGTGATGGCGGTGACGGTGATGATATCATTGGAGATGTTCACCAAGCTCCTCTACTTCACTCCCAACGCCATTCTTGCTTCCATTATTCTATCTGCACTTCCAGGCCTCATTGATCTTCACAAAGCTTATAATATCTGGAAGATCGACAAGCTCGACTTCTTGGCTTGCCTTGCAGCTTTTCTTGGTGTTCTCTTTCTCTCCGTCGAATTCGGCCTCCTCCTTTCGTTAGTGATATCATTTGCAAAGATAATAGTAATCTCAATCAAACCTGGGACTGAGATATTGGGAAAACTCCCTGGAAGTGATACCTTCTGTGATATTCATCAATATCCAATGGCTCTCAATACTCCTGGAGTCCTCATCATCCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAACTTCGTCAAAGATAGGATTCTGAGGTTCATCAGCAGCCAAGATGATGCATCAGCAAAGAGAATCACTCACTTCCTAGTCATTGATCTCTCCAACTTAATGAACATTGACACTTCAGGAATTGCTTCTCTTGAAGAGCTGCAGAATAGTTTGGCGGCCAGTGGAATAGAGTTGGCCATTGCAAATCCAAAGTGGCAAGTGATTCACAAGCTAAAGGTAGCAAATTTTGTTGCCAAGCTCAAAGGGAGGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCTTGCCTTACAGCTAAAATGGGAGCTATCTAA 1968 48.37 MSVANADTSLTMSDVSTVEKSSPAERAEWVANPPEPPGIWREVIESLRDTMFPDPNKLSSLKNKTGTAVVGSLLQGVFPILCWGQSYNLGKFKNDILAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGSSREIAIGPVAIVSLLLPSMIQKIQDPAADPLAYKNLVFTVTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDILSVMEAVFGSFHHHNDQWNPFNFIIGSSFLSFILITKLLGKKYKKVFWLAAIAPLLCVILSTLLVFLTRADRQGVKIVKRVPAGLNPISARHIQIHSPHFSQILNAAFIVAVIALTEAIAVGRSLASMKGYNIDGNREMVALGFMNLAGSLTSCYAATGSLSRSAVNFSAGCETVVSNVVMAVTVMISLEMFTKLLYFTPNAILASIILSALPGLIDLHKAYNIWKIDKLDFLACLAAFLGVLFLSVEFGLLLSLVISFAKIIVISIKPGTEILGKLPGSDTFCDIHQYPMALNTPGVLIIRVKSGLLCFANANFVKDRILRFISSQDDASAKRITHFLVIDLSNLMNIDTSGIASLEELQNSLAASGIELAIANPKWQVIHKLKVANFVAKLKGRVFLSVGEAVDACLTAKMGAI 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23719862 23728369 - CmPI595203_07g009440.1 Cmu07g0944 420495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0944 655 CDD STAS_SulP_like_sulfate_transporter 528 638 - -
Cmu07g0944 655 FunFam Sulfate transporter 31 507 650 - -
Cmu07g0944 655 MobiDBLite consensus disorder prediction 1 20 - -
Cmu07g0944 655 ProSiteProfiles STAS domain profile. 544 647 IPR002645 -
Cmu07g0944 655 MobiDBLite consensus disorder prediction 1 33 - -
Cmu07g0944 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Cmu07g0944 655 Gene3D STAS domain 507 650 IPR036513 -
Cmu07g0944 655 Pfam STAS domain 528 643 IPR002645 -
Cmu07g0944 655 Pfam Sulfate permease family 92 476 IPR011547 GO:0016020(InterPro)
Cmu07g0944 655 SUPERFAMILY SpoIIaa-like 534 647 IPR036513 -
Cmu07g0944 655 NCBIfam sulfate permease 79 638 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu07g0944 655 PANTHER SULFATE TRANSPORTER 68 648 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0944 Cmu-Chr7:23719862 Cmu11g1533 Cmu-Chr11:27641386 2.10E-180 dispersed
Cmu07g0944 Cmu-Chr7:23719862 Cmu03g1490 Cmu-Chr3:11229215 3.50E-223 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0944 K17469 - csv:116403192 1111.29