Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g0957 ATGATGGTGGAGTTCCATGGAGAAATCCGAGACCCCAACGATGGTGAAGACCAAGAACATGAAGAACAAGAAGAGGAAATTAGCTACGATGATCTCAAGAAACGAATGTGGAAAGATCGACAAAGGTTGAAGAAGATGAAGGAGAAGCGTGATGATGAAGAGCCTGAATCCGCCGCTAGAGAAGAAGCCTCTCGCCGTAAGAAAATGGCTAGAGCTCAAGATTCAATCCTCAAGTATATGGATAAGATCATGGAAGCTTGTAAGGCACAAGGGTTTGTTTATGGCATCGTCCCCGAAAAGGGTAAGCCCGTCACCGGCTCCTCCGAGAGCCTCCGTGAGTGGTGGCGGAATGACGTCCGATTCGAACAAGATGCTCCCATGGCCATAGCAAAATTCCTCCCCAAAGTAATCGAAGAATCAGGGCTCGATCCCAATTCGTTTTTGCACCTACTCACCGATTTACAGGACACAACATTAGGCTCCATTCTCTCTGCTCTGATGCAGCACTGTATTCCCCCGCAGAGGAAATTCCCACTGGAGAAGGGTTTAGCGCCGCCGTGGTGGCCGACGGGTAACGAGCTTTGGTGGGGAGAACAGGGTCCCGCCGGCGGGCATGGTGTTCCGCCGTACAAAAAGCCCCACGACCTCAAAAAGGCTTGGAAAATCAGTGTCCTGGCGGCGGTGATCAAACACATGTCCCCTGATATGGACAACATGAGGAAATTAGTTCGGCAATCGAAGAATTTACAAGCAAAAATGACGGCAAAAGAGACGCTTACTTGGGCTAAGGTAGTGAATCAAGAAGAAGCCCTGTCACAACTAACCAGAAAAAAACTCAAAATCACACCCGACGTAGAAGAAGAAGAAGAAGAAAAAGAACACGAGAAAAACAGAGGCGAACAGGGCACGGATGGAATTATGGAGAAACGAAAGTGCATATTCGAAGAAGAAGCTGTAGCCGATTCGATACTGTACCCATGCCAGAATCAATGGTGCCCACAGAGCGAGGTGCTGATGGGATTCATGGACAAGAACGCAAGAACAGAGCATGAGACGCAGTGCATTTACAGAGGCGGGCAGACGGCGGAACAAGAACAATTCTCAGAGGAGCAGTCGATCGACACGCATTTGAAGAGCGTGGTGGATTGGATGAACTGGGAGTTATCAAGAGCAGAGCCGGGCAGCGACGAGGCAAGGATCGAAGATGCCGGAGACGGGTCGGGCAGCAGCACGGTGGAGGATTACTGGAATGGCGGCGCGGTGGAGGAGGCGTTTGAGATGCAGAGAAGGAGTATGGATTTGAATGCGAGTCCGGCGGAGGATTTGGGTGCCCAACAAGATGCCACTTCCATTTGGGATTTGAGATACGAATGGGCTGAGGAATGA 1386 50.36 MMVEFHGEIRDPNDGEDQEHEEQEEEISYDDLKKRMWKDRQRLKKMKEKRDDEEPESAAREEASRRKKMARAQDSILKYMDKIMEACKAQGFVYGIVPEKGKPVTGSSESLREWWRNDVRFEQDAPMAIAKFLPKVIEESGLDPNSFLHLLTDLQDTTLGSILSALMQHCIPPQRKFPLEKGLAPPWWPTGNELWWGEQGPAGGHGVPPYKKPHDLKKAWKISVLAAVIKHMSPDMDNMRKLVRQSKNLQAKMTAKETLTWAKVVNQEEALSQLTRKKLKITPDVEEEEEEKEHEKNRGEQGTDGIMEKRKCIFEEEAVADSILYPCQNQWCPQSEVLMGFMDKNARTEHETQCIYRGGQTAEQEQFSEEQSIDTHLKSVVDWMNWELSRAEPGSDEARIEDAGDGSGSSTVEDYWNGGAVEEAFEMQRRSMDLNASPAEDLGAQQDATSIWDLRYEWAEE 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24151536 24152921 + CmPI595203_07g009570.1 Cmu07g0957 420508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g0957 461 FunFam Ethylene insensitive 3-like 1 142 279 - -
Cmu07g0957 461 MobiDBLite consensus disorder prediction 44 67 - -
Cmu07g0957 461 MobiDBLite consensus disorder prediction 282 303 - -
Cmu07g0957 461 Gene3D - 58 141 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cmu07g0957 461 Gene3D - 142 278 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cmu07g0957 461 MobiDBLite consensus disorder prediction 391 412 - -
Cmu07g0957 461 MobiDBLite consensus disorder prediction 1 16 - -
Cmu07g0957 461 SUPERFAMILY DNA-binding domain of EIN3-like 148 271 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cmu07g0957 461 Coils Coil 29 49 - -
Cmu07g0957 461 Pfam Ethylene insensitive 3, DNA-binding domain 30 269 IPR047091 GO:0003700(InterPro)
Cmu07g0957 461 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 14 390 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
Cmu07g0957 461 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0957 Cmu-Chr7:24151536 Cmu08g0805 Cmu-Chr8:20333249 8.50E-83 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6535 PF04873 EIN3 3.00E-110 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g0957 K14514 - csv:116406095 719.539