Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cmu07g1007	ATGTGCTGCTCCTTCATACATTCCAACAAAACCACAAACCCGACCCGATCCGGGGAAAAAAAGAAAAAAACTATCGTCTCTCACGTGCGCCGAACTCCGACACGTGTAGCATCTCGACAGAGACCGTTGAGAAACGCTGCTCCGCCGAACCGCCACGTGTTCAACTCTGTTTGGTTCTTCTGTCACAGACGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAACACTTTCCTCCGCCGTTCGCGGTGGTCCATCTAAGATCCGATCGCTGTCGCCGTCCAGCGCCACCGGCGAGCATCCGATTCAGATATCTCTCACTCTCAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTTGTTTCTTAGTGTGTGTGCGTGTGTGCGTGAGTGTGTGTTGGAGATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGGGAGAACAACAAGAGAAGAGAGAGAAGGAGAAGAGCTATTGCGGCAAAGATCTTTGCCGGACTCAGGATGTACGGGAACTACAAGCTTCCCAAGCATTGCGACAACAATGAGGTCCTTAAAGCTCTCTGCAATGAGGCGGGATGGACCGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGATCAGCAGCTGCAAGCCCGTACGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGGTAATCCGAATGCTGACGGAAGTTCGCTTATACCCTGGCTCAAAAACCTTTCAACGTCATCATCTTCAGCATCCTCGTCTAAACTCCCAAATCATTATATTCATGGAGGTTCCATCAGTGCTCCGGTAACTCCTCCTCTGAGTTCCCCAACTGCTAGAACGCCCCGACTCAAAGCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAGTGCACAATACTATTCCTCCCAGCCATCTTCTACTCCACCAAGTCCTGGGCGTCAGATTCTTCCCAATCCAGAATGGTTTGCTGGCCTTAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCGACAAACCCATTTGGTTTCAAGGAAGCAGCAATGACTGGTGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTCATCTCTGATGAGTTCGCCTTTGGAAGCAATGCAGCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGACCTAGAACTCACTCTTGGAAACTCAAGGACCAGGTAA	1383	49.46	MCCSFIHSNKTTNPTRSGEKKKKTIVSHVRRTPTRVASRQRPLRNAAPPNRHVFNSVWFFCHRRKRKRKRKRKRKTLSSAVRGGPSKIRSLSPSSATGEHPIQISLTLSSSSSSSSSSSSLFLSVCACVRECVLEMTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSQPSSTPPSPGRQILPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSRTR	460

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
7	24814404	24819976	-	CmPI595203_07g010070.1	Cmu07g1007	420558

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cmu07g1007	460	MobiDBLite	consensus disorder prediction	223	257	-	-
	Cmu07g1007	460	MobiDBLite	consensus disorder prediction	226	257	-	-
	Cmu07g1007	460	MobiDBLite	consensus disorder prediction	83	98	-	-
	Cmu07g1007	460	MobiDBLite	consensus disorder prediction	29	48	-	-
	Cmu07g1007	460	PANTHER	BES1/BZR1 HOMOLOG PROTEIN 3-RELATED	136	460	IPR033264	GO:0003700(InterPro)\|GO:0006351(InterPro)\|GO:0009742(InterPro)
	Cmu07g1007	460	Pfam	BES1/BZR1 plant transcription factor, N-terminal	139	274	IPR008540	-
	Cmu07g1007	460	MobiDBLite	consensus disorder prediction	328	348	-	-
	Cmu07g1007	460	MobiDBLite	consensus disorder prediction	65	98	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Cmu03g1334	Cmu-Chr3:8442914	Cmu07g1007	Cmu-Chr7:24814404	2.70E-123	dispersed
	Cmu07g1007	Cmu-Chr7:24814404	Cmu08g1466	Cmu-Chr8:26688814	2.00E-44	dispersed
	Cmu07g1007	Cmu-Chr7:24814404	Cmu01g1863	Cmu-Chr1:32215237	1.50E-50	transposed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	6540	PF05687	BES1_N	2.80E-65	No_clan	Cmu	TF

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cmu07g1007	-		-	-	0.0