Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu07g1022 | ATGGCAATTTCCCATTTAGTACCTTATTATTCGCCTCTTCTACGCTTTTCTCTCCCTTCGACAAAGCTCACTCCTCAACTCCATTCTCACAGATACCGCTTCTTCTCCCTCCGTGCTTCTATGGCGTCTTCACCTGCTCGCAAGGTTTTGGTTCCGGTTGCCAACGGCACCGAGCCGCTTGAGGCAGTCATCACCATTGACGTGCTTCGACGTGCTGGAGCTGATGTTACCGTTGCTTCCGTCGAGAATCATATTCGTGTTGATGCTGCGCATCAGATCAAGATTGTTGCGGATTCTCTCATTTCCGATTGCGCGGATACTGTTTTCGATCTCATCGCCCTTCCTGGAGGTATGCCAGGTGCTACCAGTCTTAGAGATTGTGAAGTTTTGCAGAACATAGTGAAGAAGCAAGCTGCAGATGGTCGACTTTATGCTGCCATCTGTGCTTCACCTGCAGTGGTGCTTGGATCATGGGGTTTGCTGAAAGGGTTGAAAGCCACATGCTATCCATCATTTATGGAGCAACTGGGATCTACTGCAACTGCTGTTGAATCCCGAGTACAGATTGATGGCCAAGTTGTGACAAGTCGTGGGCCTGGTACTACCTTGGAGTTTGCCGTTGCTCTGGTTGAGCAGTTGTATGGGAAAGAAAAAGCTGACGAAGTTTCTGGACCTCTGTTGTTGCGTTCCAACCATGGTCATGAATATACCATAGCTGAGCACAATCAAGTAAAGTGGACATTTGATGATGGCCCAAGGATTCTTGTACCTATAGCTAATGGTACTGAGGAAATGGAGGCTGTTATGATCATTGACATTCTTCGGAGAGCAAAAGGGAAAGTGGTGGTGGCTTCTGTTGAGGACAAACTAGAGATTCTTGCATCTCGAAAAGTTAAACTGGAGGCAGATTTACTTCTTGACGAAGCTGCTGAAAAGTCATACGATCTAATTGTTTTGCCTGGAGGGCTTGGTGGCGCGGAAGCATTTGCAAAATCTGAAAAACTGATTAATTTGCTAAAAAAGCAGGGAGAATCAAACAAACCCTATGGAGCAATATGTGCATCCCCGGCTTTGGTCTTAGAACCCCACGGCTTGCTGAAGAATAAGAAAGCCACTGCTTTTCCTGCATTATGTGACAAATTGTCCGACAAAAGCGAAATTGAAAACAGAGTGGTGGTTGACGGAAACCTGATTACAAGCCGAGGACCTGGAACTACGATGGAATTTTCTCTGGCAATCGTGGAGAAGCTTTTTGGAAGGGATACAGCAGTTCAACTGGGAAAAACAATGTTGAACTCTGTTCTTGTTGCGGTTTGCTTCTTTTCGCGTTTGGCGGCTCAGGAAACCACGACTAAACAAGGCTCTATTGTTATCTCTCTTTCTTCTAAAAGAAACAGAGATTCGTTGGATGCCCAAACAATTGCAGCAGTTGAAGAGATTTCAAATATTCCGAACGTTCGCTTGTACTCATACGAAGAACTTAGAAAAGCAACTGAAAATTTCAGGTCTGGAAACAAACTTGGGCAGGGAGGTTTTGGATCTGTCTACAAGGGAAGGCTCGGAAATGGAACCCTGGGTGCCATAAAGGTACTGTCCATGGATTCAAGGCAAGGGATGCGGGAGTTTTTGGCAGAAATCAATGTGATCTCAGTTATAAACCACGATAACTTGGTTACGTTGCATGGTTGTTGTGTCGAAGGGCAGCACCGGATCTTGGTCTATCCGTACCTAGAAAATAGCAGTCTTGACAAGATGCTTTTTGGTAGAGGACATGGGAATATTCAATTAAATTGGCAAACAAGGTGCAAAATATGCATTGGCATTGCACAGGGGCTAGCGTTCCTTCATGAGGAGGTTCAGCCGCATGTTATACATAGGGACATCAAGGCAAGCAATATCCTGCTTGATAAGGATTTAACCCCAAAAATTTCTGATTTTGGTCTTGCTAGACTACTCCCTGCTCACTTGACCCATGTTAGTACACGTGTTGCCGGGACAACAGGTTATCTTGCACCTGAATTTGCTATACGGGGGCAAGCGACAAGAAGAACAGATATTTATAGTTTTGGTGTCTTACTCTTGGAGATTGTTTGTGGGAGATACAACATAAATAGACGGTTTCCTGCTGAGGAACCATACCTTCTTGAAATGGTATGGGAGCATCATGAGAAAGGGCAATTGCTGGAATTGGTAGACCTATCATTACATGGAGACTATGGGACTGAGGAGGCCTGCAGATATTTAAAAGTTGGTCTTCTCTGCACCCAAGATATGCCAAAACTCCGTCCATCTATGTCGACCGTCGTCAAGATGCTAACAGGTGATATTGATATATCTGATCAAACAATATCAAGACCAGGAATGCTTTCAGAGTTCATGCTTCGAAAAGATGTACTATGCAAGAAGGGCGAGTTAACAACTGAAGACTCAGGAAAGCCAATTGATTCAACTTCATCATCAGGATACATTGACACCTCACATGCTACAATAACCTTCAATTCGATATTTGATCGTAGTAACTGA | 2523 | 44.51 | MAISHLVPYYSPLLRFSLPSTKLTPQLHSHRYRFFSLRASMASSPARKVLVPVANGTEPLEAVITIDVLRRAGADVTVASVENHIRVDAAHQIKIVADSLISDCADTVFDLIALPGGMPGATSLRDCEVLQNIVKKQAADGRLYAAICASPAVVLGSWGLLKGLKATCYPSFMEQLGSTATAVESRVQIDGQVVTSRGPGTTLEFAVALVEQLYGKEKADEVSGPLLLRSNHGHEYTIAEHNQVKWTFDDGPRILVPIANGTEEMEAVMIIDILRRAKGKVVVASVEDKLEILASRKVKLEADLLLDEAAEKSYDLIVLPGGLGGAEAFAKSEKLINLLKKQGESNKPYGAICASPALVLEPHGLLKNKKATAFPALCDKLSDKSEIENRVVVDGNLITSRGPGTTMEFSLAIVEKLFGRDTAVQLGKTMLNSVLVAVCFFSRLAAQETTTKQGSIVISLSSKRNRDSLDAQTIAAVEEISNIPNVRLYSYEELRKATENFRSGNKLGQGGFGSVYKGRLGNGTLGAIKVLSMDSRQGMREFLAEINVISVINHDNLVTLHGCCVEGQHRILVYPYLENSSLDKMLFGRGHGNIQLNWQTRCKICIGIAQGLAFLHEEVQPHVIHRDIKASNILLDKDLTPKISDFGLARLLPAHLTHVSTRVAGTTGYLAPEFAIRGQATRRTDIYSFGVLLLEIVCGRYNINRRFPAEEPYLLEMVWEHHEKGQLLELVDLSLHGDYGTEEACRYLKVGLLCTQDMPKLRPSMSTVVKMLTGDIDISDQTISRPGMLSEFMLRKDVLCKKGELTTEDSGKPIDSTSSSGYIDTSHATITFNSIFDRSN | 840 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 24961755 | 24976714 | + | CmPI595203_07g010220.1 | Cmu07g1022 | 420573 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu07g1022 | 840 | Gene3D | Phosphorylase Kinase; domain 1 | 472 | 576 | - | - | |
| Cmu07g1022 | 840 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 783 | - | - | |
| Cmu07g1022 | 840 | CDD | STKc_IRAK | 507 | 774 | - | - | |
| Cmu07g1022 | 840 | ProSiteProfiles | Protein kinase domain profile. | 501 | 783 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cmu07g1022 | 840 | FunFam | Serine/threonine-protein kinase receptor | 472 | 576 | - | - | |
| Cmu07g1022 | 840 | Pfam | Protein tyrosine and serine/threonine kinase | 504 | 769 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cmu07g1022 | 840 | Gene3D | - | 40 | 241 | IPR029062 | - | |
| Cmu07g1022 | 840 | Gene3D | - | 248 | 436 | IPR029062 | - | |
| Cmu07g1022 | 840 | NCBIfam | DJ-1 family glyoxalase III | 253 | 426 | IPR006287 | - | |
| Cmu07g1022 | 840 | NCBIfam | DJ-1 family glyoxalase III | 48 | 223 | IPR006287 | - | |
| Cmu07g1022 | 840 | Pfam | DJ-1/PfpI family | 47 | 212 | IPR002818 | - | |
| Cmu07g1022 | 840 | Pfam | DJ-1/PfpI family | 253 | 415 | IPR002818 | - | |
| Cmu07g1022 | 840 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 623 | 635 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cmu07g1022 | 840 | SUPERFAMILY | Class I glutamine amidotransferase-like | 253 | 431 | IPR029062 | - | |
| Cmu07g1022 | 840 | CDD | GATase1_DJ-1 | 254 | 417 | - | - | |
| Cmu07g1022 | 840 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 396 | 796 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
| Cmu07g1022 | 840 | FunFam | Protein DJ-1 homolog C | 41 | 231 | - | - | |
| Cmu07g1022 | 840 | SUPERFAMILY | Class I glutamine amidotransferase-like | 47 | 228 | IPR029062 | - | |
| Cmu07g1022 | 840 | FunFam | Protein DJ-1 homolog C | 246 | 434 | - | - | |
| Cmu07g1022 | 840 | SUPERFAMILY | Protein kinase-like (PK-like) | 480 | 772 | IPR011009 | - | |
| Cmu07g1022 | 840 | CDD | GATase1_DJ-1 | 49 | 213 | - | - | |
| Cmu07g1022 | 840 | Coils | Coil | 283 | 303 | - | - | |
| Cmu07g1022 | 840 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 577 | 784 | - | - | |
| Cmu07g1022 | 840 | SMART | serkin_6 | 501 | 772 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu05g2600 | Cmu-Chr5:34680157 | Cmu07g1022 | Cmu-Chr7:24961755 | 8.00E-79 | dispersed | |
| Cmu07g1022 | Cmu-Chr7:24961755 | Cmu09g2157 | Cmu-Chr9:37667281 | 2.00E-90 | dispersed | |
| Cmu10g2160 | Cmu-Chr10:27639042 | Cmu07g1022 | Cmu-Chr7:24961755 | 2.90E-76 | dispersed | |
| Cmu02g0636 | Cmu-Chr2:6259084 | Cmu07g1022 | Cmu-Chr7:24961755 | 1.30E-100 | transposed | |
| Cmu03g1194 | Cmu-Chr3:6371222 | Cmu07g1022 | Cmu-Chr7:24961755 | 1.50E-89 | transposed | |
| Cmu07g1057 | Cmu-Chr7:25472242 | Cmu07g1022 | Cmu-Chr7:24961755 | 4.50E-131 | transposed | |
| Cmu01g2325 | Cmu-Chr1:35427622 | Cmu07g1022 | Cmu-Chr7:24961755 | 1.80E-65 | wgd | |
| Cmu11g1726 | Cmu-Chr11:29386547 | Cmu07g1022 | Cmu-Chr7:24961755 | 2.40E-62 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 75664 | PF00069 | Pkinase | 2.70E-43 | CL0016 | Cmu | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu07g1022 | K03152 | - | csv:101212934 | 775.007 |