Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1025 ATGCCGCAAGATCATCCAAAGAAGGATGCCAAAGAAATAAACTTTTTTACTGAATATGGGGATGCTAACAGATATAAGATTCTTGAAGTTGTTGGAAGGGGAAGTTATGGAGTTGTTTGTTCTGCTATTGACATGCAAACTGGGGAGAAAGTTGCAATAAAGAGAATTCATGATATTTTTGATCACGCATCTGATGCTATTCGAATCCTTCGTGAAGTTAAGTTGCTTAGATTGTTGCGGCATCCTGATATTGTTGACATCAAGCGTATTATGTTACCACCTTCTAAAAAGGAATTTAGGGACATTTATGTGGTTTTTGAGCTTATGGAATCTGATCTTCATCAAGTTATTAAAGCAAATGATGACTTGACGCGTGAACATCATCAATTTTTCCTCTATCAAATGCTACGTGCATTGAAATTCATGCATACAGCAAATGTGTATCATAGAGATCTGAAGCCGAAGAATATATTGGCAAATGCGAATTGCAAGCTTAAAATTTGTGATTTTGGGCTTGCAAGAGTTGCTTTCAGTGACACCCCAACTACTGTATTTTGGACAGACTATGTTGCTACTCGATGGTACAGAGCTCCAGAGTTGTGTGGATCATTCTGTTCCAAGTATACTCCTGCGATAGATATTTGGAGTGTCGGCTGCATATTTGCTGAGGTTTTGATGGGGAAGCCACTGTTTCCGGGTAAAAGCGTTGCCCATCAATTGGACTTGATTACTGATCTTCTTGGGACTCCCTCATTGGAAACCATTGCAGGAGTTCGGAATGAAAAGGCCAGGAAATATTTGACAGAAATGAGAAAGAAATCTGCAGTGCCATTTTCACAAAGATTTCCTAATGCAGATCCTACAGCCATCCGCTTATTGCAAAGACTATTAGCATTTGATCCAAAGGATCGACCATCGGCTGTGGAGGCTCTGGCTGATCCTTACTTTAAGGGCCTAGCTAAAGTTGAAAGAGAGCCTTCTTGTCAACCAATCTCAAGAGCGGAATTTGAGTTTGAGAGACGGAAATTAACAAGGGATGATGTGAGGGAATTGTTATACAGAGAAATATTAGAATATCATCCTCAAATTCGTGAAGATTACTTGAATGGAACTGAGACTTCAAAGCTCCTTTATCCTAGCGTTACAGGTCATTTTAAAAGCCAATTCACCTTCCACAAGGAGAATAACGGTAAAAGCGCACCTGTTTTGCCTCTAGAACGGAAACACTTCTCCCTGCCACGGTCCACTGTTTGCACAAATTTGGCTTCACCTGATCGTGAACCTGTTCGACGAAATCCCAAAGTCTTTAATAATAGTATGGGATTACCTGATAGAAAATTTGTGAATCCATCCAAGGCTCATCCTCCACCTAAAGTGCCTACTGGACGAGTTGCTGGGCCTGTCCTCCCTTATGAGCACAGAAACATAAAAGATGTTTATTCGAACCTAACGTCACAGATTAGAAGTTTGGATTTCTGA 1479 40.43 MPQDHPKKDAKEINFFTEYGDANRYKILEVVGRGSYGVVCSAIDMQTGEKVAIKRIHDIFDHASDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKKEFRDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFCSKYTPAIDIWSVGCIFAEVLMGKPLFPGKSVAHQLDLITDLLGTPSLETIAGVRNEKARKYLTEMRKKSAVPFSQRFPNADPTAIRLLQRLLAFDPKDRPSAVEALADPYFKGLAKVEREPSCQPISRAEFEFERRKLTRDDVRELLYREILEYHPQIREDYLNGTETSKLLYPSVTGHFKSQFTFHKENNGKSAPVLPLERKHFSLPRSTVCTNLASPDREPVRRNPKVFNNSMGLPDRKFVNPSKAHPPPKVPTGRVAGPVLPYEHRNIKDVYSNLTSQIRSLDF 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25002257 25006160 + CmPI595203_07g010250.1 Cmu07g1025 420576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1025 492 FunFam Mitogen-activated protein kinase 111 339 - -
Cmu07g1025 492 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Cmu07g1025 492 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cmu07g1025 492 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1025 492 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1025 492 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cmu07g1025 492 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524(InterPro)
Cmu07g1025 492 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1025 492 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Cmu07g1025 492 FunFam Mitogen-activated protein kinase 14 119 - -
Cmu07g1025 492 MobiDBLite consensus disorder prediction 423 464 - -
Cmu07g1025 492 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1025 492 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1829 Cmu-Chr2:32199954 Cmu07g1025 Cmu-Chr7:25002257 1.80E-205 dispersed
Cmu07g1025 Cmu-Chr7:25002257 Cmu09g2134 Cmu-Chr9:37458842 6.10E-204 dispersed
Cmu01g2323 Cmu-Chr1:35405756 Cmu07g1025 Cmu-Chr7:25002257 3.40E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75665 PF00069 Pkinase 5.20E-65 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1025 - - - 0.0