Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1048 ATGGGAGACGAAGTAAAATTGTTGGATTTTTGGGGAAGCATGTTTGGGATGCGAGTTAGAATAGCTCTGGCCGAGAAGGGTGTAGCGTATGAATATGTGGAACAAGACTTGAGGAACAAGAGCCTTTCGCTTCTTCAAATGAACCCAATTTACAAGAAAGTCCCTGTTCTGATTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAATATATTGAAGAAGTATGGAAGGATAAAGGTCCTAATTTGTTGCCATTTGATCCTTATGAGAGAGCTCAGGCTAAGTTTTGGGTGGATTTCATGGACAAGAAGCTTTATGAAGCTGCAAAAGGGGTATGGGCAGGGAAAGGAGAGGAGCATGAGGCAGGGAAGAAGGAGGTGATACAAATATTGAAGCAACTAGAGGAAGTAATTGGGGAGAAGGCTTACTTTGCAGGTGATTGTTTGGGATTTGTTGATATTGGTTTGATTGGATACTACACTTGGTTTTATACCTATGAGACAATTGGGAACTTCAGCATTGAGTCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGTTTGCAAAATGAGAATGTGGCTAACTCCCTGGCTGACCCCAAGAATGTGTATGAATTTGTGGTTCAATGGAAGAAAAGTTTTGGGCTTGACTAA 663 40.87 MGDEVKLLDFWGSMFGMRVRIALAEKGVAYEYVEQDLRNKSLSLLQMNPIYKKVPVLIHNGKPICESSIIVQYIEEVWKDKGPNLLPFDPYERAQAKFWVDFMDKKLYEAAKGVWAGKGEEHEAGKKEVIQILKQLEEVIGEKAYFAGDCLGFVDIGLIGYYTWFYTYETIGNFSIESECPKIMSWVKRCLQNENVANSLADPKNVYEFVVQWKKSFGLD 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25353578 25354337 + CmPI595203_07g010480.1 Cmu07g1048 420599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1048 220 Gene3D - 89 220 - -
Cmu07g1048 220 Gene3D Glutaredoxin 1 87 - -
Cmu07g1048 220 FunFam Glutathione S-transferase U20 89 220 - -
Cmu07g1048 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Cmu07g1048 220 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cmu07g1048 220 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Cmu07g1048 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 210 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cmu07g1048 220 SFLD Main (cytGST) 2 217 - -
Cmu07g1048 220 CDD GST_C_Tau 90 210 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cmu07g1048 220 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cmu07g1048 220 FunFam Tau class glutathione S-transferase 1 86 - -
Cmu07g1048 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cmu07g1048 220 Pfam Glutathione S-transferase, C-terminal domain 118 192 IPR004046 -
Cmu07g1048 220 CDD GST_N_Tau 5 78 - -
Cmu07g1048 220 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1048 Cmu-Chr7:25353578 Cmu07g1050 Cmu-Chr7:25360496 1.40E-59 dispersed
Cmu07g1047 Cmu-Chr7:25342752 Cmu07g1048 Cmu-Chr7:25353578 2.00E-98 tandem
Cmu07g1048 Cmu-Chr7:25353578 Cmu07g1049 Cmu-Chr7:25356052 6.20E-100 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1048 K00799 - csv:101218323 386.341