Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1049 ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTGCCATCTGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAACAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTACGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTTGACTAA 660 40.91 MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPDPKKVCDFVLQMKKKYGLD 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25356052 25356820 + CmPI595203_07g010490.1 Cmu07g1049 420600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1049 219 Gene3D Glutaredoxin 1 87 - -
Cmu07g1049 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cmu07g1049 219 Gene3D - 88 219 - -
Cmu07g1049 219 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Cmu07g1049 219 SFLD Main (cytGST) 2 217 - -
Cmu07g1049 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cmu07g1049 219 FunFam Tau class glutathione S-transferase 1 87 - -
Cmu07g1049 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cmu07g1049 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Cmu07g1049 219 FunFam Glutathione S-transferase U20 88 219 - -
Cmu07g1049 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Cmu07g1049 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cmu07g1049 219 CDD GST_N_Tau 5 78 - -
Cmu07g1049 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cmu07g1049 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2488 Cmu-Chr5:33746061 Cmu07g1049 Cmu-Chr7:25356052 6.60E-36 dispersed
Cmu06g1506 Cmu-Chr6:26332020 Cmu07g1049 Cmu-Chr7:25356052 1.50E-40 dispersed
Cmu07g1047 Cmu-Chr7:25342752 Cmu07g1049 Cmu-Chr7:25356052 8.60E-102 dispersed
Cmu07g1048 Cmu-Chr7:25353578 Cmu07g1049 Cmu-Chr7:25356052 6.20E-100 tandem
Cmu07g1049 Cmu-Chr7:25356052 Cmu07g1050 Cmu-Chr7:25360496 3.70E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1049 K00799 - csv:101217848 407.142