Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1051 ATGGAGGACGATTACTCTATCTTCCCTCCCGATTCAGATCTCGATTTCAGCTTCACGTCCACCGCCACCGACCGCACCTTCACCACCTCCTCCAGCGCTCGAACCAGCCTTGCTCGGAGCAGTCTAACACTCAGCTTCAATGAATCTCGTCTCTCTGCCGCTGCAGCAGCCGCCGCTGCCGTTGTTAACCTCCGCCCCCACCGCCACTCCGACCCTCACTGGTCCGCCATTAAAGCCGCTACTACTCTCTCTTCCGACGGCCATCTTCACCTCCGCCACCTCAAACTCATCCGCCATCTCGGTACCGGCAACCTCGGCCGTGTTTTCTTATGCCATTTGAGAGACAACGATCACGCCAGTTTCGCTTTGAAGGTGGTGGATAAGGAGGCTCTTAGTAATAAGAAGCTTTTGCAGGTCCAAACGGAAGCCGAGATTCTGGCTTCCTTGGACCACCCTTTTCTCCCAACTCTCTACGCGCGTCTCGACGTCTCTCACTACACGTGCCTCCTTATCGACTATTGTCCTGCCGGTGACCTCCATTCACTCCTCCGCAAACAGCCTGGTAACCGTCTTTCTGTCGCGGCGGCGAGATTCTTTGCCGCCGAGATCCTGGTGGCGCTCGAGTACCTTCACGCGCTTGGGATTGTGTACCGCGATCTCAAGCCTGAGAACGTTCTTTTGCGTGAGGATGGCCACGTCATGCTCTCGGATTTCGACTTGTGTTTTAAATCCGACGTGGTACCCACTTTTCATACGTGGACTCGCCCGGGACCACATCCTGCTACCTGCTGCTTTGGATGGAAGACGGCGGAGGAGGAAGAGGAGATTGTCGGGGAGTTTGTGGCGGAGCCGACAGCGGCGTTTTCGAAGTCGTGCGTAGGGACTCATGAGTACTTGGCGCCCGAGTTAGTGACCGGTGGTGGCCACGGAAACGGCGTAGACTGGTGGGCGTTTGGGGTGTTCGTTTACGAGCTTCTGCACGGGACGACGCCGTTTAAAGGAGTGAATAAGGAGGGTACGTTAAGGAACATTGCGTCGTCGGAGGGGGTGAAGTTCCGGGCGGCGGCGGCGGAGGAAGAGGAAGGGATGGCGGACGCGAGAGATCTAATAGAGAGGCTGCTAGTGAAAGATCCGGCGAGGCGGTTGGGTTCCGGGAAAGGGGCGACGGAGATCAAACGGCATCCGTTCTTCGACGGGATAAAATGGCCGTTGATCAGGACATATCGGGCGCCGGAGGTGTATGGGCTGATGAGAAAAGCCAGATCCCACGTGAGCCACGTGACAGGCGTGACCCACCGCATGCGGCGGCGGGGCTGGTGGAACTGGAGGAAGCTCATTAGCAACCGTTTAATTAAAAATGGAAGTTCAAGTAAATCTCATACCAATACCAATTATTATAGTTATAGTTCCAAAAATAAGACGGGTTGA 1428 55.74 MEDDYSIFPPDSDLDFSFTSTATDRTFTTSSSARTSLARSSLTLSFNESRLSAAAAAAAAVVNLRPHRHSDPHWSAIKAATTLSSDGHLHLRHLKLIRHLGTGNLGRVFLCHLRDNDHASFALKVVDKEALSNKKLLQVQTEAEILASLDHPFLPTLYARLDVSHYTCLLIDYCPAGDLHSLLRKQPGNRLSVAAARFFAAEILVALEYLHALGIVYRDLKPENVLLREDGHVMLSDFDLCFKSDVVPTFHTWTRPGPHPATCCFGWKTAEEEEEIVGEFVAEPTAAFSKSCVGTHEYLAPELVTGGGHGNGVDWWAFGVFVYELLHGTTPFKGVNKEGTLRNIASSEGVKFRAAAAEEEEGMADARDLIERLLVKDPARRLGSGKGATEIKRHPFFDGIKWPLIRTYRAPEVYGLMRKARSHVSHVTGVTHRMRRRGWWNWRKLISNRLIKNGSSSKSHTNTNYYSYSSKNKTG 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25374442 25375869 - CmPI595203_07g010510.1 Cmu07g1051 420602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1051 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1051 475 ProSiteProfiles Protein kinase domain profile. 94 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1051 475 Gene3D Phosphorylase Kinase; domain 1 94 177 - -
Cmu07g1051 475 SUPERFAMILY Protein kinase-like (PK-like) 70 426 IPR011009 -
Cmu07g1051 475 Gene3D Transferase(Phosphotransferase) domain 1 289 410 - -
Cmu07g1051 475 Gene3D Transferase(Phosphotransferase) domain 1 178 244 - -
Cmu07g1051 475 FunFam Serine/threonine-protein kinase OXI1 178 245 - -
Cmu07g1051 475 Pfam Protein kinase domain 96 242 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1051 475 Pfam Protein kinase domain 289 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1051 475 SMART serkin_6 94 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1051 475 FunFam Serine/threonine-protein kinase OXI1 287 415 - -
Cmu07g1051 475 CDD STKc_phototropin_like 92 413 - -
Cmu07g1051 475 MobiDBLite consensus disorder prediction 453 475 - -
Cmu07g1051 475 PANTHER FLIPPASE KINASE 1-RELATED 46 416 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1051 Cmu-Chr7:25374442 Cmu11g0276 Cmu-Chr11:3292389 7.10E-93 dispersed
Cmu07g1051 Cmu-Chr7:25374442 Cmu02g2184 Cmu-Chr2:35479174 6.70E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75666 PF00069 Pkinase 7.10E-54 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1051 - - - 0.0