Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1102 ATGCTGCTGGGTTCTTCTTGTTTCCAGAAGAAGATGGCCAGTGAAAACTTTGGGTTATGGCTATTTTTTATTGCTTCTCTACAGTTTTTCCTTCAAGCACAGTGTATTAATGTGGGGATTACTTATGTTCAAGATGCTGGTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGATTTGGCTCGGGAGTCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACAAGTTGCCTCCAACGCAGGGACACTCGTTTAGGATCGTCTAAGAAAATGGTTACCGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAGAAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTTACCGGAGACGTTGAAGCCGTTGATCCCGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATCAATAACCTACTTGCCAAGGGAATGAAGAATGCAAAAAACGCTATTCTCTCGGGTTGTTCGGCGGGTGGATTGAGTTCCATTTTACATTGTGATAACTTCAAATCTCTACTTCCTCCTACTACTAAAGTGAAGTGCCTCTCAGATGCAGGATACTTTATCAACGCGAAAGATGTCTCTGGAGCGCAGCACATTGAAGACTTCTACAGCGACGTAGTTGCTACCCATGGTTCTGCAAAGAATTTGCCTATATCATGCACATCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAATGCAGCCTATGATTCATGGCAGATAAAGAATATACTGGCACCTGGTGTTGCTGATCCACACGGTACTTGGCATGACTGCAAGCTTGACATCAAAAACTGCTCGCCCATTCAGATTCGAATCATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCAAGAGGGCTGTTCATAGATTCTTGCTATGCCCATTGCCAAACTGAAATGCAGGAGACATGGTTACGAGCGGATTCTCCCATGCTGAGTAAGACGGACTTGCGACATCTTTGCAAGAGCACGCTGGTTCATTTGTTTCCATGGAAGCTTAGACGCCCAGTAGGTTTTGCTAGAATGGATTGGGCATTCGTCCACAAAGCTTGGGACAGATGGGCTTCCGCCAGCATTGGCACCTTCGGCCAGCCATTGAAAGCTGCTCTGTTGATTAATTATGATCCAACTGGACCTTCCCGCTTGCTTTCAACCATTGCAGAACAAGAAGGAATATTGCTTAATCCCATAGAGCTGAATCAGTTTGTCGATTTCATCAAACGGGACAAACCCCAAAATGAGAGTTTCAGCATTGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAGGGTGTTGTTATAGTGCAAACAACAGCATTTATGTTGGTTGCTATGTATGATGGTTCAATTGCAGCAGCATCTCGCGCTATGGCAGCTGCGGATCAGTTATCTTGGCAATTAGGCAGGAAAAATCTTTAG 1626 43.54 MLLGSSCFQKKMASENFGLWLFFIASLQFFLQAQCINVGITYVQDAGIKGAVCLDGSPPAYHFSDGFGSGVDNWLIQLEGGGWCNNVTSCLQRRDTRLGSSKKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIINNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEDFYSDVVATHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQIRIMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRADSPMLSKTDLRHLCKSTLVHLFPWKLRRPVGFARMDWAFVHKAWDRWASASIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFVDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFMLVAMYDGSIAAASRAMAAADQLSWQLGRKNL 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26081005 26088412 - CmPI595203_07g011020.1 Cmu07g1102 420653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1102 541 Pfam Profilin 437 536 IPR048278 GO:0003779(InterPro)
Cmu07g1102 541 SUPERFAMILY Profilin (actin-binding protein) 404 532 IPR036140 -
Cmu07g1102 541 Pfam Pectinacetylesterase 32 372 IPR004963 GO:0016787(InterPro)
Cmu07g1102 541 PANTHER NOTUM-RELATED 35 373 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cmu07g1102 541 Gene3D Dynein light chain 2a, cytoplasmic 403 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0919 Cmu-Chr5:8329309 Cmu07g1102 Cmu-Chr7:26081005 4.90E-95 dispersed
Cmu07g1102 Cmu-Chr7:26081005 Cmu04g0857 Cmu-Chr4:23101855 2.10E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1102 K19882 - vvi:100245856 781.556