Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1265 ATGCGTATCTCTTCCGGAGACACAAAAAAGAGCAAGGCTATAATTAACCGAGCTACGCCAAGTGAATCACAGCCACTGCAATTCTTCTCCACAATCTCCGAAATGGAGAATCTAAGGACTCCATTTAGGGGTATCGTGGGTGATATCAGAGGAAGAGCGGCCTGTTATAAGCAAGATTGGGTTGATGGTCGACTTTCAGGGATTGGAATTTTGGCCCCAACTGCTTACATTTTTTTCGCTTCTGCACTTCCTGTCATTGCTTTTGGTGAGCAATTGAGCCGAGATACAGATGGAAGCTTGAGCACAGTAGAAACATTGGCTTCCACAGCCATTTGTGGCATCCTTCATTCCATTCTTGGTGGGCAACCTCTCCTAGTTGTAGGAGTTGCAGAACCTACAATTATTATGTATACTTATTTGTACAATTTTTGCAAGAAAAGGGAAGATATAGGGGGAGACCTCTTCTTGGCTTGGGCAGGATGGGTTTGTGTCTGGACAGCCCTCTTGCTGTTTCTTCTTGCTATATTCAACGCTTCCAGTCTAATCAACAAATTTACAAGGATTGCAGGGGAACTTTTTGGCATGTTAATCTCCGTTTTGTTCATTCAAGAAGCTATTAAGGGAGTGGTGAGCGAATTTGAAGTTCCCCAGACCGAGAACACAAGTCTAGAGAAGTATCAATTTCATTGGCTTTACACGAATGGATTACTGGGAATCATCTTTACTTTTGGCCTTCTCTATACCGCCTTGAAGAGCAGAAAGGCAAGATCGTGGTTGTATGGGACAGGCTGGCTAAGGAGTTTCATTGCAGACTATGGAGTTCCTCTGATGGTTGTAGTATGGACTGCACTATCATTTAGTGTACCAAGCAAAGTCCCGTTTGGAGTTCCTAGAAGACTTCAAAGTCCTTTGGCATGGCAATCTACTTCTCTGCACCATTGGACCGTTGTCAAGGACATGGGGAAGATACCTCCTGCATACATCTTCATGGCCTTTATTCCTGCTGTGATGATTGCAGGACTTTATTTTTTTGATCATAGTGTCGCTTCTCAGATGGCACAACAAAAGGAGTTTAATCTCAAGAACCCTCCTGCTTACCACTATGACATCCTGTTGCTGGGATTTATGACATTGGTTTGTGGGTTAATCGGGCTTCCTCCTTCAAATGGGGTCTTGCCACAGTCCCCCATGCACACCAAGTGTCTTGCAACTCTCAGGAGGCGTTTGATGCGAAGGAAGATGGTAGAAAGTGCAAAGGAAAGCATAAAAAGGAAAGCTAGTGATTCCGAAATCTACGGCCAAATGCAAGCTGTGTTCTTAGAAATGGAGAGCAGCCCAATTACGACATCAGTAGTCAAAGAACTGGAAGATTTGAAGGAGGCAGTCATGAAAGGTGAAAGTAAGGATGAAAATGCAAATGTTACATTTGACCCAGAGAAGCATATTGATGCTTATCTTCCTGTTCGAGTGAACGAGCAAAGATTGAGCAATCTACTGCAATCACTTCTGGTGGCAGCATCAGTATTTGCTTTACCAGCAATAAAGAAGATACCAACATCAGTTCTCTGGGGGTACTTCGCGTATATGGCCATTGACAGTCTACCTGGAAACCAATTTTGGGAAAGGATTTTACTTCTCTTTGTAATGCCTAGTCGACGTTACAAGGTCCTAGAAGGTTTTCATGCTTCCTTCGTGGAGTCTGTTCCATTCAAATACATAGCCGCATTCACTCTATTTCAATTTGTATATTTTCTCATTTGTTTTGGAGTGACTTGGATCCCCATAGCTGGAGTCTTGTTTCCTTTGCCTTTCTTCCTTCTCATCGGCATCAGACATCGCATCCTTCCCAAGCTACTCCAACCTCATTATTTGCAGGAGCTCGACGCGGTTGAGTACGAAGAACTAACCGGTACCTCAATTCTCTCGCTTAGCTTGTCTATCAAGGAAAAGAATACCACTCGTATAGTTGATAATGAAGATGAAGTTGAAATATGTGATGCTGAAATACTTGATGAGTTGACAACCCATAGAGGGGAGTTGAAAGTTAGAACTAAAAGCTTCAACGAGGATAGACATAGTCAGATTCATCCTGACCAAGGCATTGGAAATGACAAATACTAA 2121 43.05 MRISSGDTKKSKAIINRATPSESQPLQFFSTISEMENLRTPFRGIVGDIRGRAACYKQDWVDGRLSGIGILAPTAYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGILHSILGGQPLLVVGVAEPTIIMYTYLYNFCKKREDIGGDLFLAWAGWVCVWTALLLFLLAIFNASSLINKFTRIAGELFGMLISVLFIQEAIKGVVSEFEVPQTENTSLEKYQFHWLYTNGLLGIIFTFGLLYTALKSRKARSWLYGTGWLRSFIADYGVPLMVVVWTALSFSVPSKVPFGVPRRLQSPLAWQSTSLHHWTVVKDMGKIPPAYIFMAFIPAVMIAGLYFFDHSVASQMAQQKEFNLKNPPAYHYDILLLGFMTLVCGLIGLPPSNGVLPQSPMHTKCLATLRRRLMRRKMVESAKESIKRKASDSEIYGQMQAVFLEMESSPITTSVVKELEDLKEAVMKGESKDENANVTFDPEKHIDAYLPVRVNEQRLSNLLQSLLVAASVFALPAIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLEGFHASFVESVPFKYIAAFTLFQFVYFLICFGVTWIPIAGVLFPLPFFLLIGIRHRILPKLLQPHYLQELDAVEYEELTGTSILSLSLSIKEKNTTRIVDNEDEVEICDAEILDELTTHRGELKVRTKSFNEDRHSQIHPDQGIGNDKY 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 27922302 27927129 - CmPI595203_07g012650.1 Cmu07g1265 420816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1265 706 Gene3D Helical hairpin bin 52 94 - -
Cmu07g1265 706 PANTHER ANION EXCHANGE PROTEIN 27 677 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cmu07g1265 706 Pfam HCO3- transporter integral membrane domain 41 224 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu07g1265 706 Pfam HCO3- transporter integral membrane domain 488 630 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu07g1265 706 Pfam HCO3- transporter integral membrane domain 229 407 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0492 Cmu-Chr1:5048089 Cmu07g1265 Cmu-Chr7:27922302 8.10E-300 transposed
Cmu01g1274 Cmu-Chr1:25345869 Cmu07g1265 Cmu-Chr7:27922302 1.40E-218 transposed
Cmu04g0339 Cmu-Chr4:9726151 Cmu07g1265 Cmu-Chr7:27922302 3.10E-08 transposed
Cmu10g1945 Cmu-Chr10:24995149 Cmu07g1265 Cmu-Chr7:27922302 7.00E-217 transposed
Cmu07g1265 Cmu-Chr7:27922302 Cmu08g1246 Cmu-Chr8:24825907 2.70E-269 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1265 K24194 - csv:101210964 1232.62